Gene Gbem_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3313 
Symbol 
ID6780171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3810274 
End bp3811017 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID642769305 
Producthypothetical protein 
Protein accessionYP_002140105 
Protein GI197119678 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGAC ATAATAAATG GAGCACCATC AAACACAAGA AAGGCGCCGC CGATGCCAAG 
CGGGGCAAAG TATTCACCAA GATAATCAAG GAAATCACCG TTGCCGCGAA ACTCGGCGGC
GGGGATCCGG ACGGCAACCC GCGCCTTAGA ACCGCTATAG ATAAGGCAAA AGGCGAGAAC
ATGCCGAAGG ACAACGTCGA GCGCGCGATC AAAAAGGGCG TCGGCGGCCT GGAAGGGACC
ACCTACGAAG AGACCACCTA CGAGGGTTAC GGCCCCGGCG GCACCGCGGT TCTGGTCGAG
GTCATGACCG ACAACCGCAA CCGCACCGTC TCCGATGTGA GGAGCATATT CACCAAGTGC
AACGGCAACA TGGGTGAGTC CGGCTGTGTT TCCTGGCTTT TCGACAAGAA GGGATTGCTG
GTTTTCCCGA AGAGCATCGA CTTCGACAAG CTGTTCGAAG CCTCCATCGA GGCGGGCGCC
GACGACGTGA CCGATGAAGA CGAGCAGTAC GAAGTGCTGA CCGACCCGGC CGCGTTCCAC
CAGGTGAAGA CTGCCCTGGA GGGAGCAGGC TTCAAGGCCG AGTCCGCCGA GATCACCATG
ATTCCGCAGA CCATGGTGAA GCTTGAAGGA AAGAACGCAG AGAACATGCT GAAGCTGATG
GACCGTATGG AAGACAACGA CGACGTCCAG AACGTCTACG CGAACTTCGA CATCTCCGAA
GAAGAGATGG AAAAGATGAT GTAG
 
Protein sequence
MSGHNKWSTI KHKKGAADAK RGKVFTKIIK EITVAAKLGG GDPDGNPRLR TAIDKAKGEN 
MPKDNVERAI KKGVGGLEGT TYEETTYEGY GPGGTAVLVE VMTDNRNRTV SDVRSIFTKC
NGNMGESGCV SWLFDKKGLL VFPKSIDFDK LFEASIEAGA DDVTDEDEQY EVLTDPAAFH
QVKTALEGAG FKAESAEITM IPQTMVKLEG KNAENMLKLM DRMEDNDDVQ NVYANFDISE
EEMEKMM