Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3313 |
Symbol | |
ID | 6780171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3810274 |
End bp | 3811017 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642769305 |
Product | hypothetical protein |
Protein accession | YP_002140105 |
Protein GI | 197119678 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGAC ATAATAAATG GAGCACCATC AAACACAAGA AAGGCGCCGC CGATGCCAAG CGGGGCAAAG TATTCACCAA GATAATCAAG GAAATCACCG TTGCCGCGAA ACTCGGCGGC GGGGATCCGG ACGGCAACCC GCGCCTTAGA ACCGCTATAG ATAAGGCAAA AGGCGAGAAC ATGCCGAAGG ACAACGTCGA GCGCGCGATC AAAAAGGGCG TCGGCGGCCT GGAAGGGACC ACCTACGAAG AGACCACCTA CGAGGGTTAC GGCCCCGGCG GCACCGCGGT TCTGGTCGAG GTCATGACCG ACAACCGCAA CCGCACCGTC TCCGATGTGA GGAGCATATT CACCAAGTGC AACGGCAACA TGGGTGAGTC CGGCTGTGTT TCCTGGCTTT TCGACAAGAA GGGATTGCTG GTTTTCCCGA AGAGCATCGA CTTCGACAAG CTGTTCGAAG CCTCCATCGA GGCGGGCGCC GACGACGTGA CCGATGAAGA CGAGCAGTAC GAAGTGCTGA CCGACCCGGC CGCGTTCCAC CAGGTGAAGA CTGCCCTGGA GGGAGCAGGC TTCAAGGCCG AGTCCGCCGA GATCACCATG ATTCCGCAGA CCATGGTGAA GCTTGAAGGA AAGAACGCAG AGAACATGCT GAAGCTGATG GACCGTATGG AAGACAACGA CGACGTCCAG AACGTCTACG CGAACTTCGA CATCTCCGAA GAAGAGATGG AAAAGATGAT GTAG
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Protein sequence | MSGHNKWSTI KHKKGAADAK RGKVFTKIIK EITVAAKLGG GDPDGNPRLR TAIDKAKGEN MPKDNVERAI KKGVGGLEGT TYEETTYEGY GPGGTAVLVE VMTDNRNRTV SDVRSIFTKC NGNMGESGCV SWLFDKKGLL VFPKSIDFDK LFEASIEAGA DDVTDEDEQY EVLTDPAAFH QVKTALEGAG FKAESAEITM IPQTMVKLEG KNAENMLKLM DRMEDNDDVQ NVYANFDISE EEMEKMM
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