Gene Gbem_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3293 
Symbol 
ID6780151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3785700 
End bp3787115 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content66% 
IMG OID642769286 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002140086 
Protein GI197119659 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000048644 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTCA AACAGTTTAA TTTGCACCCC AAGGTCCAGG CAGGCATCGA GGCCATGGGG 
TACGTCACCC CGACCCCCAT CCAGTTGCAG GCGATTCCCT CGGTCATCTC CGGGCAGGAC
GTACTCGGCC TGGCCCAGAC CGGCACCGGC AAGACTGCCG CTTTCGGCCT TCCCATGCTG
CACCGCCTGG TGCAGGAAGA GCGCGGGCAT GTCCGCGGTC TGGTCCTCGC CCCCACCCGT
GAGCTTGCAG AGCAGATCAA CGATGCCCTG AACGGCATGG GGAAGCAGAC CCGCCTGAGA
AGCGTCACGG TATATGGCGG GGTCAACATC AACACCCAGA TCAAGAAGCT CAAAGAAGGT
GCCGAAATCG TGGTCGCCTG CCCGGGGCGC CTTTTGGACC ACATCTCCCA GGGGACCATC
GACCTCTCCA GGGTCGAGAT CCTGGTGCTG GACGAGGCGG ACCAGATGTT CGACATGGGC
TTTCTCCCCG ACGTGAGGAA GATCTTGAGG GCGCTCCCCG GCAAGAGGCA GAACCTCATG
TTCTCCGCCA CCATGCCCGA CGATATCCGC AGGCTGGCTC ATGAGATCCT GCGCAACCCG
GTCACGGTGC AGGTGAGCCG CACGGCTCCC GCCGCTACCG TGTCGCATGC GCTCTACCCC
GTGGGGCAGC ACCTGAAAAC CCCGCTTCTC TTCGAGATGC TTAAGCACAC CGACACCGAG
AGCGTGCTGA TCTTCACCAA GACCAAGCAC CGCGCCAAGA GGGTAGGGGA GCAACTGGAG
AAGGCCGGCT ACAAGGCGAC CTCGCTGCAG GGGAACCTTT CCCAGAACAG AAGGCAGGCG
GCACTCGACG GCTTCAGGGA TGGCACCTTC CAGATCATGG TCGCCACCGA CATCGCCGCG
CGCGGCATCG ACGTCTCGCT CATCTCCCAC GTCATCAACT ACGACATCCC GGATACCCCC
GAGGCCTACA CCCACCGCAT CGGCCGGACC GGCCGTGCCG CCAAGACCGG CGACGCCTTC
ACCATGGTGA CCTCGGAAGA CGACTACACG GTGCGCAGCA TCGAGAAAGT GTTGGGAACG
AAGATCGAGC GCCGCCGCAT CGAGGGGTTC GACTACGCGG TCCCCGCTCC GCAAAAGGAC
ACCGAGTTCG CCCGGCCGCC CCGCGAACCT CAGCGCCGGA GAGACGGAGC CAAGCCCGGC
GCCGGGAGAC CCGCCGCAGC CGGACCCGCC GGGGCCAAAC CGGCTTCCGC AGTGGGCGCG
AAAGGTAACG CAGCCGCTTC CGGCCGTCCT GCCGCTCACG GCAGCAAAGA CGGCTCGGCA
GATGGCGGCC ATGCTTCCGG GCCTGCTGGA AAGCACCGGC AGCACCCCGG CGGCAACCGC
CCCGCGAACC ACGCCGCCCG CCGCAGCGGC AGGTAG
 
Protein sequence
MDFKQFNLHP KVQAGIEAMG YVTPTPIQLQ AIPSVISGQD VLGLAQTGTG KTAAFGLPML 
HRLVQEERGH VRGLVLAPTR ELAEQINDAL NGMGKQTRLR SVTVYGGVNI NTQIKKLKEG
AEIVVACPGR LLDHISQGTI DLSRVEILVL DEADQMFDMG FLPDVRKILR ALPGKRQNLM
FSATMPDDIR RLAHEILRNP VTVQVSRTAP AATVSHALYP VGQHLKTPLL FEMLKHTDTE
SVLIFTKTKH RAKRVGEQLE KAGYKATSLQ GNLSQNRRQA ALDGFRDGTF QIMVATDIAA
RGIDVSLISH VINYDIPDTP EAYTHRIGRT GRAAKTGDAF TMVTSEDDYT VRSIEKVLGT
KIERRRIEGF DYAVPAPQKD TEFARPPREP QRRRDGAKPG AGRPAAAGPA GAKPASAVGA
KGNAAASGRP AAHGSKDGSA DGGHASGPAG KHRQHPGGNR PANHAARRSG R