Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3278 |
Symbol | |
ID | 6780136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3771545 |
End bp | 3772546 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642769271 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002140071 |
Protein GI | 197119644 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAAGA AGGGGATTAT TGCGGCATTG CTGCTGGCTG TGGTGGTGGC GGTTGTTTTC TACCTTCGCC ATCACCGGGA CGGGGAGAAC TCCGCGGCGC TGCGCATCTC TGGGAACATC GAACTTACCG AGGTGCAGCT GAGCTTCAAG ACTTCCGGCC GGGTCCAGGA GCGGCTGGTC GACGAGGGTA TGCAGGTTGC CCGCGGCCAG GTCGTGGCGC GCCTGGAAGA GCGCGAGCTC GCCGACGCGC TGAAGCTCGC GCAGGCGGAT GAGGCAGCCT CCGCCGCGTC GCTGGCGGAA CTGGAAGCCG GCAACCGCAG GGAAGAGGTG GCCCAGGGGG CGGCGCTTCT GGCGCGCGCC GAGGCCCAAG CCGCGCAGGT GACAGCCGAT TACGACAGGA GCAAGGCGCT CTTCGCCAGG GAGGTCATCC CCCGGCAGCA GTTCGACGCC GCCAAGGCGG CCTTTGAGGA GGCCAGGGCC TCTGTGCGCG AGCGCAGGGA AGCGCTTACG CTTTTGCGCA AGGGGGCGCG GCCCGAACGC CTGCAAGCAG CTCGTGCCGC ACATGAAGGC GCGCTGGCGC GGGTATCCAC GGCAAAGGAG CGGCTGGGGT ACGCCACCTT GGCGGCGCCC ATCTCCGGTG TGGTGCTCAA CAAATCGATC GAGCCGGGCG AACAGGTGGC TGCGGGGACC CCGGTGGTCA CGCTCGGCGA CCTTAAGGAT TGCTGGCTCA AGGGATACAT ACCCGAGACG GAACTGGCGC GGGTCAAGCT GGGGCAAAGG GCGCGGGTGA CGGCCGACGG GCTTCCGGGC AAGGCCTTCG AGGGGAGGGT GAGCTTCATC TCCAGCCAGG CGGAGTTCAC CCCCAAGAGC GTGCAGACCG AGAAGGAGCG GGTGAAGCTC GTGTACCGGG TGAAGATCAC CTTGGCCAAC CCGGGGATGG AGCTGAAACC GGGGATGCCG GCGGATGCCG TGATAGACCT GGGCGCGCCG CCGGCGCGCT GA
|
Protein sequence | MKKKGIIAAL LLAVVVAVVF YLRHHRDGEN SAALRISGNI ELTEVQLSFK TSGRVQERLV DEGMQVARGQ VVARLEEREL ADALKLAQAD EAASAASLAE LEAGNRREEV AQGAALLARA EAQAAQVTAD YDRSKALFAR EVIPRQQFDA AKAAFEEARA SVRERREALT LLRKGARPER LQAARAAHEG ALARVSTAKE RLGYATLAAP ISGVVLNKSI EPGEQVAAGT PVVTLGDLKD CWLKGYIPET ELARVKLGQR ARVTADGLPG KAFEGRVSFI SSQAEFTPKS VQTEKERVKL VYRVKITLAN PGMELKPGMP ADAVIDLGAP PAR
|
| |