| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3275 |
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| Symbol | |
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| ID | 6780133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3766573 |
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| End bp | 3769332 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769268 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002140068 |
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| Protein GI | 197119641 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCTCT CCTGGGGGGT GCTGCTGTTC GTCTGCGCCC TTGCCCTTCA TGAGCGGCAT
TCGCTCCTGG CGTCGGTGAT AGTGTTCTCC ATTGCGGCGC TGCACGCCAT GCGCCTTAAA
TGGCGGCGGC AATCGGACGA CGCGGTCCGG CGCAGCGAGG AGCAGCTCCG CATCTCGCAG
CGCATCGCCC GCATCGGGAG CTGGGACCTG GACCTCGCCA GCGGCAGGCT GGACTGCTCG
GAAGAGCTGT GCCGCATCTT CTCCGTCCCG CTCGACGAGG CGCCGGACAA CTACGACGGC
CTGCTGGCTA TTCTTCCCGA GTACGGCAAG GACGCCTTGG CCGCCGCCGT CGAGGAGGCC
TTAGCGGGGC GGGATTCCTT CGCCGTGGAA TACTCGGTAG AGCGCCCCGG CGGGAAGGAG
TCCTTCCTTT TCGAGGTGGG GGAGGTGTTC AGGGACGATT CCGGCGCCGC CTTGCGCGTG
GTGAGCGTGG TCCAGGACGT GAGCGAGCAG AAGGAGGCGG AGAACGCCCT CTTCTTCGAG
AACCGCTACC GCGGGCTGAT CGAGAACCTG CCGCAGCGCA TCTTCCTGAA GGACTGCAAC
TCCGTTTACC TCTCCTGCAA CTCCAGCTTC GCCCGCGATC TTGGTGTCGA GCCCTCCGAC
GTGTTCGGAA AGACCGACTA CGACCTCTTC GCGCCGGAGT TGGCCAAAAA GCGCCAGGAG
GACGACGGCA AGGTCATGGC GGGCGGAGCC GCGGTGGAGC GGGACGAGCA GCGCGAGAGG
GACGGCGCTT GGATCAGCAA GGCGCTCATC CCCCTTCGGG ACGACAACGA CCGTGTCTAT
GCCCTGCTCG GCATCCTGAC CGACATCACC TTTAGAAAGC GCGCCGAGGA GCAGTTGAGG
GAGAGCGAGG AGCGGTTCCG CAGCATATTC GAGCAGGCAG CGGTAGGGAT CTGCCACCTC
ACCCTGAGCG GAGAGCTGAT TCGCATCAAC AGGCGCTTTT GCGACATCCT GGGTTATGAG
CAGGAGGAAC TCTTGGGCTG GTCCCTGGAG CAGACCATCC ATCCCGACGA CCGGGAGGCC
GAGCAGCGGC AGGCCGCGCG GCTTTTGAGC CGGGAGATCG ACAACTACAG CATCGAGATC
CGCCAGATGA GGCATGACGA CACCCCGGTC TGGGTCAACC TCACCAAGTC GCTGGTATGC
GGTCCCAAGG GGGAGCCCAA GTATCTGGCC GGCATCATCG AGGACGTAAC CGCCAACAGG
GAGGCCGAGG AGCTGCGCCA CGAACGAGAC CTGGTGCAGG CGGCCAGCCG CGCCAAAAGC
CAGTTCCTGG CCAACATGGG GCACGAGATC CGCACCCCGC TTAACGCCGT CATGGGGTTG
AGCCGGCTGG CGCTTAAGAC CGAGCTCGAC CGAAAGCAGC GCGGCTACCT GGAAAAGATA
GGTTCGTCGA GCCGGACCCT TTTGAACATC ATCAACGACA TACTCGACTT CTCCAAGATG
GAGGCCGGGA AGCTGGAACT GGAGAAGACG GACCTGAACC TGTACGAGGT ACTGGGAAAC
ATCTCCGACA TGCACCAGTC CAAGGCCCAG GAAAAGGGGA TCGAATTCCG GGTCCGGCTT
GCTCCCGATC TCCCCAACAA GCTGGTGGGG GACCCGCTGC GCCTGACGCA GGTGCTGAAC
AACCTGATCG CCAACGCGGT GAAATTCACC GAAAAGGGAG AGGTGGTGGT CGCCATCAAG
CCGTTGCGGC GCGAGGAGGA AGAGGTGGTG GTCCACTTCT GCGTCCAGGA CACCGGCATC
GGCATAGCAC CCGAGCAGAT GGGAAAGATC TTCACCCCCT TCACCCAGGC GGACAGCTCC
ACTACGCGCC GCTACGGCGG TACGGGACTC GGGCTTTCCA TCAGCCGCCA GCTGGTGGAG
CTGATGGGGG GGGAACTGCA GGTGGAGAGC GTCCCCGGCT CCGGCAGCAG CTTCTCCTTC
ACCGTCCCCC TTGCCCTTCC CGACGCCGTC AACCCCGTTG CGCAACCGCG GGAACAGGAG
CTGCCGGACC TCAGGGTGCT GGTAGTCGAG CGCGACCAGG AGGTGCGCGC CGGCATCGAG
GAGATCACCG AAGGAATGTC CCTTGCGCTT GAGTACGCGG AGAGCCTGCC CCAGGCACTC
GCCGCGCTGC AGGACAAGGC TCCGCCGGAA GACCCGCCCT TCGACCTGCT GGTGGTCGAC
GGAGCGACGG CCGGACTCGA CGGCATGGAG AAGATCTGCC GCGGCATCTG GAGCCGGTAC
CGCTGCCTGC TTCCCGTCCT TGCCACCGTG AGTCGGGAGC ATTTGGAGAC GGTGCGGCAG
CAGGCGAACG AGTGGGGGGT GGCGGCGGTC CTACCCTCCC CGGCGCGCCC CTCCCATCTC
CTCGACTCGC TGGTCCGGGT GCTGGCGCGC TCCGGCGAGC TGTGGCCGGA GGTCGAACCG
TGGCCGCCGC AGAAAGCTGT CCGGCGCAGG AAACCGGCTG CCGCGGCGGG TAGATTCGAG
CCGGCGAAGC TCGCCGCCGA GAAGGCGAAG CTGGAGCGGT TGCTTGCCAA GAACAGCCTG
GACGCGAAGC GGCAGTTCGA GAAGTTTTGC GGCGCGGTAC CCGCGGGCGA CTTCACCGAA
GAACTCCAGG CGCTGGAGCG CTGCCTGGAA AAACTTGATT TCAGAAAGGC ACGGCAACTT
CTATCCGCCT TCCCGGCGGA CAGGCAGGAG CCGCACTCGG AACAAAGGGA GAGCCTATGA
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| Protein sequence | MFLSWGVLLF VCALALHERH SLLASVIVFS IAALHAMRLK WRRQSDDAVR RSEEQLRISQ
RIARIGSWDL DLASGRLDCS EELCRIFSVP LDEAPDNYDG LLAILPEYGK DALAAAVEEA
LAGRDSFAVE YSVERPGGKE SFLFEVGEVF RDDSGAALRV VSVVQDVSEQ KEAENALFFE
NRYRGLIENL PQRIFLKDCN SVYLSCNSSF ARDLGVEPSD VFGKTDYDLF APELAKKRQE
DDGKVMAGGA AVERDEQRER DGAWISKALI PLRDDNDRVY ALLGILTDIT FRKRAEEQLR
ESEERFRSIF EQAAVGICHL TLSGELIRIN RRFCDILGYE QEELLGWSLE QTIHPDDREA
EQRQAARLLS REIDNYSIEI RQMRHDDTPV WVNLTKSLVC GPKGEPKYLA GIIEDVTANR
EAEELRHERD LVQAASRAKS QFLANMGHEI RTPLNAVMGL SRLALKTELD RKQRGYLEKI
GSSSRTLLNI INDILDFSKM EAGKLELEKT DLNLYEVLGN ISDMHQSKAQ EKGIEFRVRL
APDLPNKLVG DPLRLTQVLN NLIANAVKFT EKGEVVVAIK PLRREEEEVV VHFCVQDTGI
GIAPEQMGKI FTPFTQADSS TTRRYGGTGL GLSISRQLVE LMGGELQVES VPGSGSSFSF
TVPLALPDAV NPVAQPREQE LPDLRVLVVE RDQEVRAGIE EITEGMSLAL EYAESLPQAL
AALQDKAPPE DPPFDLLVVD GATAGLDGME KICRGIWSRY RCLLPVLATV SREHLETVRQ
QANEWGVAAV LPSPARPSHL LDSLVRVLAR SGELWPEVEP WPPQKAVRRR KPAAAAGRFE
PAKLAAEKAK LERLLAKNSL DAKRQFEKFC GAVPAGDFTE ELQALERCLE KLDFRKARQL
LSAFPADRQE PHSEQRESL
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