Gene Gbem_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3273 
Symbol 
ID6780131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3764295 
End bp3765428 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID642769266 
ProductABC-2 type transporter 
Protein accessionYP_002140066 
Protein GI197119639 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCGA AGCGGGTCTC GGCTGTAGCC CGCAAGGAGT TCCTGCACGT CCTTAGGGAC 
TGGAGAAGCC TCGGGATCGG CATCGCCATC CCGCTGGTGA TGCTCTTTCT CTTCGGTTAC
GCGCTTACCC TCGACGTGGA CCGCGTGCCG CTCGTCGTCT GGGATCAGAG CCAGACCCCC
GCCAGCCGCA CCTTCATCGG CGGCTTCAGC GCCTCGCGCT ATTTTCAGCT GGTAGGGGAA
GCGGGGGGCT ACGGCGAGAT CGAGCGGGCC ATCGAGGCCC GGCGGGCGGT GATCGCGCTG
GTGGTCCCGG TAGACTTCGC CCGCGGGGTA GCCTCCGGGC GCGGCTCCTC CGTTCAGGCC
ATCATCGACG GAAGCGATTC CAACGTCGCC TCCTATGCCC TGGGGTACGC CGAGGGGGTT
ACCCGCTCCT ACAGTAACCA GGTGACCCTC GACTCCGTGA GGCGCGGCGG CCTGCCGCAG
CCTGCGGCGG GGCTGGACCT TGAGCCGCGC GTCTGGTTCA ACAGCGACAT GGAGTCGCGC
AACTACATCT TCCCGGGTCT GATCGCCGTC GTGATGATGG TGATCGCCGC CCTTTTGACC
TCCCTCACCG TGGCGCGGGA ATGGGAGGTG GGGACCATGG AGCAGCTGAT CGCGACGCCG
GTGACCCGCG GCGAGCTGAT CCTGGGGAAG CTGATCCCCT ACTTCTGCAT CGGCATGCTC
GATCTTTTGC TCGCCGTCCT AGTCGGGGAG TTTGTCTTCG CCATACCGAT GCGCGGGCAA
CTCTGGCTCA TCTTCGCCTC CTGTTCCGTC TTTCTGGCCG GCGCCCTGTC GCTCGGGATG
CTGATCAGCA TCGTCACCAA GAGCCAGTTC CTCTCCAGCC AGATCGCGCT CGTGGCCACC
ATGCTCCCCG CCTTCCTGCT TTCGGGGTTC GTCTTCCCCA TCGCCAACAT GCCGTACCCG
ATCCAGCTCT TCACCCACGT CATCACCGCG CGCTATTTCG TCACCCTCCT GCGCGGCATT
TACCTGAAGG GGCTGGGGCT TAGGCTTCTT ATCGGCGAGG CGCTCTTCCT TTTGGCCTTT
GCCGCGCTGG TGCTCACGCT GGCGCACCAC AAGCTCCGCA AGAAGATCGA GTGA
 
Protein sequence
MKAKRVSAVA RKEFLHVLRD WRSLGIGIAI PLVMLFLFGY ALTLDVDRVP LVVWDQSQTP 
ASRTFIGGFS ASRYFQLVGE AGGYGEIERA IEARRAVIAL VVPVDFARGV ASGRGSSVQA
IIDGSDSNVA SYALGYAEGV TRSYSNQVTL DSVRRGGLPQ PAAGLDLEPR VWFNSDMESR
NYIFPGLIAV VMMVIAALLT SLTVAREWEV GTMEQLIATP VTRGELILGK LIPYFCIGML
DLLLAVLVGE FVFAIPMRGQ LWLIFASCSV FLAGALSLGM LISIVTKSQF LSSQIALVAT
MLPAFLLSGF VFPIANMPYP IQLFTHVITA RYFVTLLRGI YLKGLGLRLL IGEALFLLAF
AALVLTLAHH KLRKKIE