Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3268 |
Symbol | mnmA |
ID | 6780126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3760244 |
End bp | 3761311 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642769261 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_002140061 |
Protein GI | 197119634 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0175326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGGA ATTTTAAAGG GAAGAAAGTA GCCGTCGCCA TGAGCGGCGG AGTCGATTCG TCCACGGTCG CCGCCCTCCT CAAAGAGCAG GGTGCGGAGG TGATCGGTAT CAATATGAAG CTCTTTGCGC GCGACGGCGA GGATCCGCAG GCCAAGGGCG ACGCGCAGAT CGTCGCCGAG TACCTGGGGA TCGAATTCCA CCTGGTGCAT CTGGAGGAAC AATTCTCGCG CCTCATCATG GAAGACTTCC GTGCGCAGTA CCTGGGGGGC GAGACCCCCA ACCCGTGTGT CCGCTGCAAC CGCTACGTCA AGTTCGGGCT TCTGTTGGAC AAGGCGCTGG AGCTGGGGGC GGAGTACCTG GCCACCGGCC ATTACGTGAG GACCAGCAGG GACGATGGCG GTAGCTATCA CCTGCTGAAG GCGGCTTTTC TCGCCAAGGA CCAGTCCTAC TTCCTCTACA CGCTGACCCA AAAGCAGCTC TCCCATGTGG TCTTCCCGCT GGGGGACATG CCGAGCAAGG ACGAGGTGCG CAGGCTTGCG GAAAAGTTCG GGCTCCCGGT GGCGCAAAAG AGCGACAGCC AGGAAATCTG CTTCGTTCCC GGCGACGACT ACGTCGCCTT CCTGGAAAAA GGGGGGCGGG TTGCGGGAAA AAGCGGCGAC ATCGTCCATG TCGACGGGAC CGTGCTGGGA AGGCACGGCG GCACCCACCG GTACACCATC GGCCAGAGGC GTGGGCTCGG CGTTGCCTGG AAAGAGCCGC TGTACGTGGT GTCGATCGAT GCGCTTCAGG GGAGGGTGGT GGTCGGCGAA GCCGGACAGC TCTTTGCGTC TGGGCTCGTG GCCTGCGATC TGAACTGGGT GGTGCCGGTA GAGGGGGAGA CCTTCGAGAC AACCTGCAAG ATCCGCTATC GGCAACAACC CATAGCGTGC CGGGTCAAGC TTTTGGGCGA GGGGCTGGGC GAGGTTTACT TTGCCGAGCC GCAGAAGTCG GTGACGCCGG GGCAGTCCGT GGTCTTCTAC CGCGAAGACG AGCTCCTGGG CGGCGGCCGC ATCGTCGGGA AGATCTAG
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Protein sequence | MSGNFKGKKV AVAMSGGVDS STVAALLKEQ GAEVIGINMK LFARDGEDPQ AKGDAQIVAE YLGIEFHLVH LEEQFSRLIM EDFRAQYLGG ETPNPCVRCN RYVKFGLLLD KALELGAEYL ATGHYVRTSR DDGGSYHLLK AAFLAKDQSY FLYTLTQKQL SHVVFPLGDM PSKDEVRRLA EKFGLPVAQK SDSQEICFVP GDDYVAFLEK GGRVAGKSGD IVHVDGTVLG RHGGTHRYTI GQRRGLGVAW KEPLYVVSID ALQGRVVVGE AGQLFASGLV ACDLNWVVPV EGETFETTCK IRYRQQPIAC RVKLLGEGLG EVYFAEPQKS VTPGQSVVFY REDELLGGGR IVGKI
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