| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3268 |
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| Symbol | mnmA |
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| ID | 6780126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3760244 |
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| End bp | 3761311 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769261 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002140061 |
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| Protein GI | 197119634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0175326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGGA ATTTTAAAGG GAAGAAAGTA GCCGTCGCCA TGAGCGGCGG AGTCGATTCG
TCCACGGTCG CCGCCCTCCT CAAAGAGCAG GGTGCGGAGG TGATCGGTAT CAATATGAAG
CTCTTTGCGC GCGACGGCGA GGATCCGCAG GCCAAGGGCG ACGCGCAGAT CGTCGCCGAG
TACCTGGGGA TCGAATTCCA CCTGGTGCAT CTGGAGGAAC AATTCTCGCG CCTCATCATG
GAAGACTTCC GTGCGCAGTA CCTGGGGGGC GAGACCCCCA ACCCGTGTGT CCGCTGCAAC
CGCTACGTCA AGTTCGGGCT TCTGTTGGAC AAGGCGCTGG AGCTGGGGGC GGAGTACCTG
GCCACCGGCC ATTACGTGAG GACCAGCAGG GACGATGGCG GTAGCTATCA CCTGCTGAAG
GCGGCTTTTC TCGCCAAGGA CCAGTCCTAC TTCCTCTACA CGCTGACCCA AAAGCAGCTC
TCCCATGTGG TCTTCCCGCT GGGGGACATG CCGAGCAAGG ACGAGGTGCG CAGGCTTGCG
GAAAAGTTCG GGCTCCCGGT GGCGCAAAAG AGCGACAGCC AGGAAATCTG CTTCGTTCCC
GGCGACGACT ACGTCGCCTT CCTGGAAAAA GGGGGGCGGG TTGCGGGAAA AAGCGGCGAC
ATCGTCCATG TCGACGGGAC CGTGCTGGGA AGGCACGGCG GCACCCACCG GTACACCATC
GGCCAGAGGC GTGGGCTCGG CGTTGCCTGG AAAGAGCCGC TGTACGTGGT GTCGATCGAT
GCGCTTCAGG GGAGGGTGGT GGTCGGCGAA GCCGGACAGC TCTTTGCGTC TGGGCTCGTG
GCCTGCGATC TGAACTGGGT GGTGCCGGTA GAGGGGGAGA CCTTCGAGAC AACCTGCAAG
ATCCGCTATC GGCAACAACC CATAGCGTGC CGGGTCAAGC TTTTGGGCGA GGGGCTGGGC
GAGGTTTACT TTGCCGAGCC GCAGAAGTCG GTGACGCCGG GGCAGTCCGT GGTCTTCTAC
CGCGAAGACG AGCTCCTGGG CGGCGGCCGC ATCGTCGGGA AGATCTAG
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| Protein sequence | MSGNFKGKKV AVAMSGGVDS STVAALLKEQ GAEVIGINMK LFARDGEDPQ AKGDAQIVAE
YLGIEFHLVH LEEQFSRLIM EDFRAQYLGG ETPNPCVRCN RYVKFGLLLD KALELGAEYL
ATGHYVRTSR DDGGSYHLLK AAFLAKDQSY FLYTLTQKQL SHVVFPLGDM PSKDEVRRLA
EKFGLPVAQK SDSQEICFVP GDDYVAFLEK GGRVAGKSGD IVHVDGTVLG RHGGTHRYTI
GQRRGLGVAW KEPLYVVSID ALQGRVVVGE AGQLFASGLV ACDLNWVVPV EGETFETTCK
IRYRQQPIAC RVKLLGEGLG EVYFAEPQKS VTPGQSVVFY REDELLGGGR IVGKI
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