| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3263 |
|---|
| Symbol | |
|---|
| ID | 6780121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3755072 |
|---|
| End bp | 3756238 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642769256 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002140056 |
|---|
| Protein GI | 197119629 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATCC CTTACTCCTA CAGTTTCCGC AACCTTTGGA CCCGGCGGCT CACCACCCTT
CTCACTGCGA GCGGGATGGG GCTCGTCGTC TTCGTCTTCG CCGCCACCCT CATGCTCACC
GAGGGGTTGC AAAAGACCTT GGTGCAGACC GGCTCTCCCG ACAACGTGGT GCTGCTTAGA
AAAGCTGCCG GCTCCGAGGT GCAAAGCGGC GTGGAGCGCT CCCAGGCGGC CCTTTTGGAG
AGCCAGCCCG AGGTCGCCAT CGGCGCCGAC GGAGAGCCGC TCTTAGCCAA GGAAGTAGTG
GTGCTGATCA ACCTGAAAAA GCGGGTGGGG GACAAGCCTT CCAACGTCGT CATCAGGGGG
GTGACCCCGA CTTCGCTCAA GCTGCGTCCC GCCATCCGGC TCAAGGAGGG GCGCATGCCG
CGGTCCGGTT CCGCCGAAGT AATCGCCGGC GAGAGCATAG CCCGGCGCTT CAAGGGGGGC
GGGCTGGGAG AAACCATCAG GTTCGGGATG AGGGACTGGC GGGTTGTCGG CGTCTTCGAC
GCAGGTTCCA CCGGCTTTTC CTCCGAGATC TGGGGGGACG CCGACCAGTT GATGCAGGCC
TTCCGGAGGC AAGCCTACTC CTCCATCATC TTCCGGTTGC GGGACTCCAC CGCTTTCGAT
TCCTACAAGG CGCGGGTGGA GAGCGACCCG AGGCTTACCG TCGAGGCCAA GCGCGAGACC
CAGTATTACC TGGACCAGTC CGAGGCGATG TCCAAGTTCC TCAACATACT CGGGATGGTG
TTGACCGTGG TCTTTTCCAT AGGCGCCGTG ATCGGGGCGA CCATCACCAT GTACGCCGCC
GTCGCCAACC GCGTCACCGA GATCGGGACT TTACGCGCTT TAGGGTTCCA GAGGAAGAGC
ATCCTCTCCG CCTTCATCGT CGAGGCGCTT TTTCTGGGGC TTTGCGGCGG GGGGCTGGGG
CTCTTTGCCG CGAGCTTCAT GCAGCTCATC ACCATTTCCA CCATGAACTG GGCCTCCTTC
TCCGAGCTGG CCTTTTCCTT CACGCTCAAC TTTTCCATCG TGTGGAAGTC GTTGCTTTTT
TCCGCCGTAA TGGGGCTAGT GGGAGGCACC CTCCCGGCGT TCCGTGCCTC GCGGATGAAT
ATCGTGGAAG CTCTGAGGGC AACATAG
|
|---|
| Protein sequence | MGIPYSYSFR NLWTRRLTTL LTASGMGLVV FVFAATLMLT EGLQKTLVQT GSPDNVVLLR
KAAGSEVQSG VERSQAALLE SQPEVAIGAD GEPLLAKEVV VLINLKKRVG DKPSNVVIRG
VTPTSLKLRP AIRLKEGRMP RSGSAEVIAG ESIARRFKGG GLGETIRFGM RDWRVVGVFD
AGSTGFSSEI WGDADQLMQA FRRQAYSSII FRLRDSTAFD SYKARVESDP RLTVEAKRET
QYYLDQSEAM SKFLNILGMV LTVVFSIGAV IGATITMYAA VANRVTEIGT LRALGFQRKS
ILSAFIVEAL FLGLCGGGLG LFAASFMQLI TISTMNWASF SELAFSFTLN FSIVWKSLLF
SAVMGLVGGT LPAFRASRMN IVEALRAT
|
|---|
| |