| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3258 |
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| Symbol | |
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| ID | 6780116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3749412 |
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| End bp | 3750701 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642769251 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_002140051 |
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| Protein GI | 197119624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.717858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACT ATACCGTTCG ACCCGCCAAG TCGGTGCGCG GCGAAATCAG CGTCCCCGGC
GACAAGTCCA TATCGCACCG CTCCATCATG TTCGGCTCCA TCGCCTCCGG CGTCACCACG
GTGACCGGTT TCCTCCGTGG CGAGGACGCC CTGGCCACCC TCGAAGCCTT CCGGGCCATG
GGAGTGCAGA TCGATGACGA CGGCGAGACG GTCACCATTC AGGGACGGGG GCTGCACGGA
CTGAGCGAGC CTACCGACGT CCTCGACTGC GGCAACTCCG GGACCTCGAT GCGCCTTTTG
ACCGGCCTGC TTGCCGGGCA GAACTTCTTC TCTGTCCTCT CCGGAGACAA GTACCTGCGC
GCCCGTCCCA TGAAGCGCGT GGTTGGGCCT TTGGCCCAGA TGGGCGCCCG CATCTCGGGG
CGCGCCGGCG GCGAAAAGGC CCCCCTTGCC ATCCAGGGCT CTAAACTGAA AGGGATCGAA
TACGACTCCC CCGTTTCCAG CGCACAGGTC AAGTCGGCCA TCATGCTGGC AGGGCTTTAC
GCCGGAGGCG AAACGGTGGT GCGCGAGCCG CATCTCTCCC GCGACCATTC GGAGCGGATG
CTGCGCGCTT TCGGCGCCCA TGTCGAAACC TTCCCGGGCG GCGTCAAGGT GCGGGGCGGG
GCGGAACTTA CCGGACGCGA CATCGTGGTG CCGGGCGACA TCTCCTCGGC CGCCTTCTTC
CTGGTCGCAG GGCTCATCGT CCCGGGTTCA GATCTCCTCA TCCGCGGCGT CGGCGTCAAC
CCGACCCGTA CCGGCATCAT CGATGTGCTG AAGGGTATGG GGGGCGACCT GGAACTTATA
AACCAGCGCG ACGAATCGGG GGAGCCGGTC GCCGACATCC GGGTGCGCCA CTCGAAACTC
ACCGCCATGG AGATCTCCGG AGACGTAGTG CCCCGCGCCA TCGACGAGTT TCCCGCCATC
TGCGTCGCCG CTTCGCTGGC ACAAGGGACC ACCGTGGTGC GCGACGCCGC GGAACTCCGC
GTCAAAGAGA CCGACCGCAT CTCCGCCATG GCCGACAACC TGAAGCGCGC GGGGGTCAGC
ATCGTCGAGA CCCCGGACGG CATGGAGATC ACCGGCGTTT CCTCTTTAAA GGGATGCGCC
GCCGACAGTT TCGGTGACCA CCGGATCGCC ATGTCCATGA TGGTCGCCGG GCTCGTCGCC
CAGAATGAGA CCAGCGTTTC GGACGTCGAG TGCATCGCCA CCTCGTTCCC CGGCTTCGTC
AACCTCCTTG AGGGGGTGGT GCAGCGGTGA
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| Protein sequence | MQNYTVRPAK SVRGEISVPG DKSISHRSIM FGSIASGVTT VTGFLRGEDA LATLEAFRAM
GVQIDDDGET VTIQGRGLHG LSEPTDVLDC GNSGTSMRLL TGLLAGQNFF SVLSGDKYLR
ARPMKRVVGP LAQMGARISG RAGGEKAPLA IQGSKLKGIE YDSPVSSAQV KSAIMLAGLY
AGGETVVREP HLSRDHSERM LRAFGAHVET FPGGVKVRGG AELTGRDIVV PGDISSAAFF
LVAGLIVPGS DLLIRGVGVN PTRTGIIDVL KGMGGDLELI NQRDESGEPV ADIRVRHSKL
TAMEISGDVV PRAIDEFPAI CVAASLAQGT TVVRDAAELR VKETDRISAM ADNLKRAGVS
IVETPDGMEI TGVSSLKGCA ADSFGDHRIA MSMMVAGLVA QNETSVSDVE CIATSFPGFV
NLLEGVVQR
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