Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3228 |
Symbol | |
ID | 6780086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3715301 |
End bp | 3717130 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769222 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_002140023 |
Protein GI | 197119596 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTCACT GCGTCTTCAC TGACACACCA AAACCCGCAT CGAGGTTTCG TTTCTTCCCT CCTTTCAGCA CGAATCCTTC CCCCGCCGCC GGCAACCGGG CGCTTTTCTC GCTCCTTCTG CTGGTCCTGC TGCTCTCTCT GGCCCCGCTT GCTCAGGCGC AGCAATCCGC CCCGGTCCAC TACGACCCCG CGGCCACCAT CGTGGTCGGC GGCGACCGCT CCTATCCTCC GTACGAATTC ATCGACAAGG ACGGCCGCCC GGCAGGCTAT AACGTGGATC TCACCAAGGC GATCGCCGAG GTGATGGGGA TGAAGGTGGA ATTCCGCTTC GGAAGCTGGG CGGAGATGCG CGCAGGTCTC CAGCAGGGAA AGATCAACAT CCTGCAGGGG CTCTCCTATT CGGATGAGCG CTCCCGGAGC GTCGACTTCT CGCCCCCCCA CGCCATGGTG CACCACGCCA TCTTCGCCCG CAGGGACTCG AAACGGGTCC GCACCCTGGA GGAACTGAAG GGGAAGAAGG TGATCGTCTT CCAGGACGGC ATCATGCACG AGCGCTTGAA GCTCTTAGGC TTCGGGAAGG ACCTGGTGCT CACCCCGACG CCTGCGGAGG CCCTCAGGCT TTTGGCCTCG GGTCAGTACG ACTACGCGGT GGTGGCGCAA CTCCCGGGGA TGTACCTGAT CCGCGAACTG CACTTGACCA ACCTGGTTCC GGTGGCAAAG GCCGTGGTGA GCGAGCAGTA CGGCTACGGA GTCGCCAAGG GGAATAAGGA GCTTCTGACC CGCTTCAACG AGGGGCTCGC CATCGTCATC AAGACCGGCC AGTACGCCCA GATCTACAAC AGGTGGCTCG GCGTGCACGA GCCTCCCCGG GTCACCAGGG AGATGGCGCT CAAGTACGGC GCCATGATCC TGGTGCCGCT TTTGCTGGTC TTGGCGGGGA CCGCGCTTTG GAACAAGACG CTGCACAAAC GTGTCGTCGA GCGCACCACC GAGCTGGCGC AGGAGGTCTC GGAGCGCAAC AAGGCTCTGG AGGCGTTAAG GCGCCACCAG GACAAGCTGA TCCAGGCCGA CAAGATGGCC TCTCTCGGGA CGCTGGTTTC CGGCGTCGCC CACGAGATCA ACAACCCCAA CGGCCTCTTG CTGCTTGATA TCCCGATTCT GCGGCGCGTG CACGAGGACG CGGAGGAGAT CCTCGAAGCC CGCTACCTGC AGGAGGGGGA TTTCATGCTC GGGGGAGTTC CGTATTCCGA GATGCGCGAG GAGATCCCGC GCATCCTGGA GGAGATGCAG GACGGGGCGC AGCGCATCAA GAGGATCGTG AACGATCTGA AGGACTTCGC GCGGCGCGAC GACGCAGGCT ACATGGAGCC GATCGACGTG GAGGCGGCAG CCAAGAGGGC CGTGCGCCTG GTCGAGCCGA CTATACGTTC CGCGACCAAC AGGTTCGAGG CGCTTTATGC GGGGAACCTC CCGCCGGTAT TGGGCAACGC GCAGCGCATA GAGCAGGTCA TCGTCAACCT GGTGCTCAAC GCCTGCCAGT CCCTCCCCGG CCGGGACCAG GGGGTGACGC TTACCACCTC GCTGGACAGC GAGAGCGACA GCGTGCTGAT CGAGGTGCGG GACGAAGGGG TGGGGATAGC GCAGGAGCAC CTGCCGCAGC TAGTGGATCC CTTCTTCACC ACCAAGCGGG AGACCGGAGG CACCGGGCTC GGCCTCTCCG TCTCCGCGGG AATCGTCAAG GAGCACGGGG GGACGCTCTG CTTCGCGTCG ACGCCGGGGG AGGGGACCAC GGTCACCCTT TCCCTTCCCG TTACTTCCAG GAGGTCGTGA
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Protein sequence | MSHCVFTDTP KPASRFRFFP PFSTNPSPAA GNRALFSLLL LVLLLSLAPL AQAQQSAPVH YDPAATIVVG GDRSYPPYEF IDKDGRPAGY NVDLTKAIAE VMGMKVEFRF GSWAEMRAGL QQGKINILQG LSYSDERSRS VDFSPPHAMV HHAIFARRDS KRVRTLEELK GKKVIVFQDG IMHERLKLLG FGKDLVLTPT PAEALRLLAS GQYDYAVVAQ LPGMYLIREL HLTNLVPVAK AVVSEQYGYG VAKGNKELLT RFNEGLAIVI KTGQYAQIYN RWLGVHEPPR VTREMALKYG AMILVPLLLV LAGTALWNKT LHKRVVERTT ELAQEVSERN KALEALRRHQ DKLIQADKMA SLGTLVSGVA HEINNPNGLL LLDIPILRRV HEDAEEILEA RYLQEGDFML GGVPYSEMRE EIPRILEEMQ DGAQRIKRIV NDLKDFARRD DAGYMEPIDV EAAAKRAVRL VEPTIRSATN RFEALYAGNL PPVLGNAQRI EQVIVNLVLN ACQSLPGRDQ GVTLTTSLDS ESDSVLIEVR DEGVGIAQEH LPQLVDPFFT TKRETGGTGL GLSVSAGIVK EHGGTLCFAS TPGEGTTVTL SLPVTSRRS
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