| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3211 |
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| Symbol | |
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| ID | 6780069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3700247 |
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| End bp | 3702397 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769205 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002140006 |
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| Protein GI | 197119579 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00108978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAC TCAACGACAT ACTTGAAAAG GTCGCCTCCT ACAATCCCGG TTGCGACCTC
GACCTGCTCC GCAAGGCCTA CGTCTTCTGT GCCAAGGTGC ACCAGGGGCA GACCAGGCTC
TCGGGAGAGC CGTACCTGAT CCACCCCATG GAGGTGGCCG GGATACTGGC GGACCTGCGC
CTGGACCTCC CTGCCGTGGT CACCGGGCTT TTGCACGACA CGGTCGAGGA CACCCTGACC
ACGCACGAGG AGCTGGAGTC GCTTTTCGGC GCCGAGGTGG CGAGGCTCGT CGACGGCGTC
ACCAAGATCG GCAAGATCCA CTTCAAGACC AAGGAGGAGA GCCAGGCGGA GAACTTCCGC
AAGATGCTCC TCGCCATGGC CACCGACATC AGGGTCATCC TGGTGAAACT CGCCGACCGT
CTGCACAACA TGCGCACCCT GCAGTACCAG CCCGAGCCCA AGCAGCGCAC CATCGCCAAG
GAAACCCTCG ACATCTACGC CCCCATCGCC AACCGGCTCG GGATCTCCTG GGTCAAGGGG
GAGCTGGAGG ACCTTTCCTT CCGCTACCTG GAGCCCCAGC TCTACTACGA TTTGGCCGGC
AAGGTGGCGA AGAAGAAGCA GGAGCGAGAG TCCTACGTCG CGACGGTGAA GGAGATCATC
AAGAAACAGT TGGAGGAGCA CGGCATCAAG GGGGACGTCT CCGGGCGCTC CAAGCACCTC
TACTCCATCT ACCGCAAGAT GCAGAGCCGC AACGTCGACA TCGACGAGAT CTACGACCTG
ATCGCCATCC GCGTCTCGGT GGAGGACATC CGCGAGTGCT ACGAGGTGTT GGGGATCATT
CATTCCACCT GGAAGCCGAT CCCGGGACGC TTCAAGGACT ACATCGCCAT GCCCAAGGGG
AACATGTACC AGTCGCTGCA CACGACGGTC ATCGGCCCTT ACGGCGAACG CATGGAGGTG
CAGATCCGTA CCGTGGAGAT GCACCGCGTG GCGGAGTCCG GGATCGCGGC ACACTGGAAG
TACAAAGAAG GGAAGGGGTA CGACGACAAG GACGTCAAGC GCTTCACCTG GATCAGGCAG
CTCCTCGAAT GGCAGCAGGA ACTCGACGAC TCCAAGGAGT TCATGGACAC CGTCAAGGTC
GAGCTCTTCC CCGAGGACGT CTTCATCTTC ACACCGAAAG GGGACGTGAA GGGGTTCCCC
AAGGGGTCGA CCCCCATAGA TTTCGCCTAT TCGGTCCACA CCGACGTGGG GCACCGCTGC
GTCGGCGCCA AGGTGAACGG CAAGCTGGTC CCGCTCAAGT ACGAGCTGAA GACAGGCGAC
ATCGTCGAAG TGATTACCTC GCCGCACCAC ACCCCCTCCA AGGACTGGCT GAAGATAGTC
AAGAGCTCCC GCGCGCGCAA CAAGATCAGG GCCTGGGTTA AGACCGAAGA GCGGATGCGG
AGCATCACGC TGGGTCGCGA GATCTGTGAG AAGGAGTTCC GCCGCTTCTC GCTCAACTTC
GGGAAGCTGC AAAAAACCGG CGAGTTGAAG AAGGTGGCCC AGGAGTTCGG CTTCGTGGCA
GAGGACGACC TGATGGCGTC GGTGGGCTAC GGCAAGCTCT CCGTGAACCA GATCCTTTCC
AAGCTGATCC CTGCCGAAAA GCTCGATGCC GCGAAGGAGC AGAAGGAAAC GCGCATCGGT
AAGGTGATCG AGAAGCTGAA GGGGAAATCC TCCTCGGCGA TCGAGATCAG CGGCGTCGAG
GACGTGCTGG TGCGCTTCGG CAAGTGCTGC AACCCTCTTC CCGGCGACGA GATCACCGGC
TTCATCACCC GCGGGCGCGG GGTCACCATC CACACTGCGG ACTGCCCCTT CGCCATGGCG
CTGGAGCCCG AGCGCCGCAT CGAGGTGGCC TGGAACAAGG GGAGAAAGAG CGCGCTTCCG
GTCAAGATCC GCGTCGTCTG CAACGACGAA AAGGGGATCC TGGCGAACAT CGCCACCGCC
ATCACCAACT GCGAGGCCAA CATCTCCAGC GCCTCCATCC AGAGCACCCT CGACAAGCGG
GGCGAGAACC TCTTCGAGGT GGACGTAACC GACCTAGACC ACCTGAAGAA GGTGTTCGCC
GCCATCATGA AGGTGAAGGG TGTCATCAAG GTGGAAAGGC TGAGAAGCTA G
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| Protein sequence | MIRLNDILEK VASYNPGCDL DLLRKAYVFC AKVHQGQTRL SGEPYLIHPM EVAGILADLR
LDLPAVVTGL LHDTVEDTLT THEELESLFG AEVARLVDGV TKIGKIHFKT KEESQAENFR
KMLLAMATDI RVILVKLADR LHNMRTLQYQ PEPKQRTIAK ETLDIYAPIA NRLGISWVKG
ELEDLSFRYL EPQLYYDLAG KVAKKKQERE SYVATVKEII KKQLEEHGIK GDVSGRSKHL
YSIYRKMQSR NVDIDEIYDL IAIRVSVEDI RECYEVLGII HSTWKPIPGR FKDYIAMPKG
NMYQSLHTTV IGPYGERMEV QIRTVEMHRV AESGIAAHWK YKEGKGYDDK DVKRFTWIRQ
LLEWQQELDD SKEFMDTVKV ELFPEDVFIF TPKGDVKGFP KGSTPIDFAY SVHTDVGHRC
VGAKVNGKLV PLKYELKTGD IVEVITSPHH TPSKDWLKIV KSSRARNKIR AWVKTEERMR
SITLGREICE KEFRRFSLNF GKLQKTGELK KVAQEFGFVA EDDLMASVGY GKLSVNQILS
KLIPAEKLDA AKEQKETRIG KVIEKLKGKS SSAIEISGVE DVLVRFGKCC NPLPGDEITG
FITRGRGVTI HTADCPFAMA LEPERRIEVA WNKGRKSALP VKIRVVCNDE KGILANIATA
ITNCEANISS ASIQSTLDKR GENLFEVDVT DLDHLKKVFA AIMKVKGVIK VERLRS
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