Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3204 |
Symbol | |
ID | 6780062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3694491 |
End bp | 3695168 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769198 |
Product | thymidylate kinase |
Protein accession | YP_002139999 |
Protein GI | 197119572 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00156948 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTTT TCATTACATT TGAAGGTATA GAAGGGTGCG GCAAGACCAC CCAGCTGAGG CTTTTGAAGG AGCGTCTGGA AGCTGCGGGC GAGAAGGTGA CCGTGACCCG GGAGCCTGGA GGGTGCCCGG TCGCCGACCA GATGCGCGCC ATCCTGCTGG ATGCCAAAAA CAGCGCCATC ACCCCTTTGG CTGAACTCCT TTTGTACGCG GCGGCCCGGG CGCAGCACGT GCAGGAAGTC ATCGTCCCAG CGCTTGAGCG TGGCGAGACG GTCCTTTGCG ACCGCTTTAC CGACGCGACC GTCGCCTACC AGGGGCACGG CAGGGGTCTC GACCTCACCG TCATCGAAGA ACTCAACACC CTTGCCACCG GGAGGGTGCA GCCGGCGCTC ACCGTGCTCA TCGACTGCCC GGTGGAAGTG GGACTTTCCC GCGCCCTGGC CCGGATCGAG GCGACCAGCG GGGCGAAGGA AGAACGTTTC GAGCGCGAGT CCCTGCTCTT CCACCAAAAG GTACGCAACG GCTACCTGAC GCTGGCGGCC GCTTTCCCGG AACGCTTCGT GGTTGTCGAC GGCTCGGGAG ACGTGCGGCA GACCGGGCTC CTCGTCGCAG AGGCCCTTCG CCAGAGGATG CAGAGCCTTG GCAAGGCCGG ACTCGCAGCA GTCAAGGCAG GGTGCTAG
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Protein sequence | MGFFITFEGI EGCGKTTQLR LLKERLEAAG EKVTVTREPG GCPVADQMRA ILLDAKNSAI TPLAELLLYA AARAQHVQEV IVPALERGET VLCDRFTDAT VAYQGHGRGL DLTVIEELNT LATGRVQPAL TVLIDCPVEV GLSRALARIE ATSGAKEERF ERESLLFHQK VRNGYLTLAA AFPERFVVVD GSGDVRQTGL LVAEALRQRM QSLGKAGLAA VKAGC
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