| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3143 |
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| Symbol | |
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| ID | 6780002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3628284 |
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| End bp | 3630128 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769140 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002139941 |
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| Protein GI | 197119514 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATA CGAAAGAACT GGAATTCGCG GACATAGGGA CAGTCAACTG CCACGACCAC
ATCTGCCTCA TCTACCATGG AGAGGGAGAG ATCTACCACC CGGTGTTTCC CTTCATACAG
AAGGGGGTGG CTATCGGAGA GCGCTGCATC TATCTGCATG GATCGGAGGA CCGGCTGGAG
CGTTTGCTGC AGAATGCGGT CTCCTCACAA CAGGAGGACT CAGGCGCTCT GATACTGTTC
CCGCTTGAGG ATTTCTGGCA CAAGGATGGC GCGTTCAAGC AGGAACGGGT GCTGAAACTC
TTGCACAAGC TCTGCGCTGC CGCCATTGAT GACGGCTTTA GCGGCACCAG GGTCATCTGT
GACATGGGGT GGGCCGTCTT AGAGCCTAAG CGCCAGGAAC TGCTGCAGCG TATTGAGAGG
GAATTGACCG CATTCGCTTC ACAAAACGAC GTGACGCTAC TTTGCCTGTA CAACCGGGAG
CTTTTTCCGG AGGAAACCAT CCTGGAGCTG GCGAAGCTGC ACCCGCAGGT GATCGTCGGC
GGCAGAACCT GCAGCAACCC TTTCTATTTC CCTGCGGCTT CGGATCGCCG CATCAAGGGG
GCGCGTTGCG AAGTGGACGT CTTTATGGCA ACAGCGCAGA GAATGACGAC GCTTTTGGCC
GAGAGCGACC GTCTCAAGCA GGAGCTGGAA CAGGCCTATG GCGCGCTGGC CCGCAAGATC
TATGAGAATT GGCAGGAGGA GGACTCGCTT AGGGCCAACG AGAAGGAGAT GCAGGAGAAG
GACGAGGCTC TTTTGGAACA CAAGAGGAAA TTGCAGACCA TCCTGCAGCA TATACCGGCC
ATGCTGATGG CGTTCGACAG CGGCGACAGG CTTGCCGCCT GCAATCATGA GTTCGAACGT
GCCACGGGCT TCAGGGTGGA AGAGGTTATC GGCAAGCCCA TGTTGGAGCT GCTCCACGTG
GAAGGGGAGC AGCGCGAAGA GGTGGTCTCG GCGCACCCGC GGGATGGGGG GGATTACCGG
GGGAGGGAGT GGAGCCTGCG CTGCAGAGAC AACTCGGTGA AGACCGTCGC CTGGTCCAAT
ATCTCCCGCT ATGTCCCGAT CAGGGGGTGG AACAACTGGA TCGTGGGACT GGACGTGTCG
GCCAAACTCC ATGCGGAGAA CGCCCTCAAG GGGCTGCGCG ACGAGTTGGA GGCGAGAAAC
GCCGAGCTGG AGGCGTTCGG CGAGGCCGTC TCCCACGACC TTAGCGGGCG GCTGGCCCGG
ATCGGCGAGG ACTGCCGCGC AATGCAAAAG CTCTACGGCG GCGACCTCTC GACCCCCTGC
CGCGAGATGC TGCAAAAGGT AGGCGTCGCG GCGCTGGAGC TGGCAGGCCC CATCGCTGCC
CTGCAGCGGC TGACCGCGCT GGCGGCTGCC GGCCTGCAGC CCGAAGAGGT GGATTTGAGC
GCCATGGCCT CGGAGATAGC CGAGAAGCTA TCGGATACGG TTGCCCGCCC GGTCACCTTC
AGGATCGAGG ACGGTGTCAC TGTGACCGGC GACCGGGAGA TGCTCCGGTT GGCCATGGAA
CAACTGCTGG AGAATGCCTT CAACTGCACT GTGGGCGTAA AGCACCCGGT GATCAAGTTC
GGCACCGCGC AGGTGAAAGG GGAGCGGAGC TTCTACGTCT CCGACAACGG CCCCAGGCCC
GGCGAGCAGC CGGGCAAGGG AATAGTCGGC AAAGCAGAGG GGCAGGAGCG CATCTCCAGC
GGCATCGGCC TTGCCACGGT ACAAAGGATC ATCAACCTGC ACCGCGGCCG GTTCTGGTGC
GCCGATCAAA CGGGCAGGGG AGGTACCCTG TACTTCCAGG TTTAG
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| Protein sequence | MEDTKELEFA DIGTVNCHDH ICLIYHGEGE IYHPVFPFIQ KGVAIGERCI YLHGSEDRLE
RLLQNAVSSQ QEDSGALILF PLEDFWHKDG AFKQERVLKL LHKLCAAAID DGFSGTRVIC
DMGWAVLEPK RQELLQRIER ELTAFASQND VTLLCLYNRE LFPEETILEL AKLHPQVIVG
GRTCSNPFYF PAASDRRIKG ARCEVDVFMA TAQRMTTLLA ESDRLKQELE QAYGALARKI
YENWQEEDSL RANEKEMQEK DEALLEHKRK LQTILQHIPA MLMAFDSGDR LAACNHEFER
ATGFRVEEVI GKPMLELLHV EGEQREEVVS AHPRDGGDYR GREWSLRCRD NSVKTVAWSN
ISRYVPIRGW NNWIVGLDVS AKLHAENALK GLRDELEARN AELEAFGEAV SHDLSGRLAR
IGEDCRAMQK LYGGDLSTPC REMLQKVGVA ALELAGPIAA LQRLTALAAA GLQPEEVDLS
AMASEIAEKL SDTVARPVTF RIEDGVTVTG DREMLRLAME QLLENAFNCT VGVKHPVIKF
GTAQVKGERS FYVSDNGPRP GEQPGKGIVG KAEGQERISS GIGLATVQRI INLHRGRFWC
ADQTGRGGTL YFQV
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