| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3125 |
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| Symbol | |
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| ID | 6779984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3609065 |
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| End bp | 3610222 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769122 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002139923 |
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| Protein GI | 197119496 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCCGCA AAACCGCTCT CATCGCCTGC GCCGATCTGG CAGGCTACAG CTACGGCGAC
CACCATCCGT TCAAGGTTCA GCGCTACCGG CTGGCCCACG ACCTCATGGA GGCCTACGGC
CTCTTGGAGC TGCCGGGGAT GGAACTGGTG CGGCCGCGCC CGGTCGGCGA GGCGGAACTG
TTGACGGCGC ACAGCCGCGA GTACCTGGAC CGGCTGCGGG AGTTCAGCGC TTCGGCAGAA
CCCAGGGCGG ATTTCCGCTT CGGCCTTGGC GACGTGGAAA ATCCTGTCTT CCCAGGCGTT
TACGACTGGG CCTGCCTCGG GGTCTCCGGT ACCGTGGAGG CGGCGCGCCT GGTGACGGAA
GAAGGCTTTG CCGCCGCCTT CAACCCCTTC GGCGGCTATC ATCACGCCCA AAGAAGCCGC
GCGTCGGGGT TTTCTTATTT GAACGACGCC GTGGTGGCCA TAAACCACCT GGTGCAACAG
GGGAAGCGGG TGGTTTACCT GGACCTGGAC GCCCACCACG GCGACGGGGT GCAAAACGCC
TTCTACCAAA GCGACCGGGT CTTGAGCATC TCGCTGCACG AAAGCGGCGT CTATTTCTTT
CCCGGCACCG GCTTCGAGCG GGAGTCGGGC GAGGGGGCGG GGCGGGGCTA CTCGGTGAAC
CTGCCGCTTT TGGCCCACAC CGACGACGCG CTCTTCATGA AGGCGTTCGA CGAGGTGGCC
TTCCCGCTGA TCGCGGCGTT CGACCCGGAC GTGCTCTTCA CCCAGCTTGG CGCCGACACC
TTCAGGACCG ATCCGCTCAC CAGGCTCGAG GTCACCACCC ACGCCTATTC TTATATACTG
CGCAAACTGC GCGCCCTGCA GATCCCCTGG GTGGCGGTGG GGGGAGGGGG GTACGACATG
ATGAACGTGG CCCGCGCCTG GACCATCGCC TGGGGGGTGA TGAACGACCG GGTGCTCTCG
CCCCGGCTTC CCGCGTCCTT CGTCAAACTG ATCTCGGACC TTGGGTACCC GCACCGCATG
CTCCTGGACG CCATGCATTG GGCCCAGGAG GACGACCGCA ACCGGGCGCT GGACGCGGTG
GAGAAGAGCA TCGCTTACCT GCGGGCCCAG ATCTTCCCGG TTCTCATCGG CGACTATGGC
ACTAAACGGA GCACATGA
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| Protein sequence | MSRKTALIAC ADLAGYSYGD HHPFKVQRYR LAHDLMEAYG LLELPGMELV RPRPVGEAEL
LTAHSREYLD RLREFSASAE PRADFRFGLG DVENPVFPGV YDWACLGVSG TVEAARLVTE
EGFAAAFNPF GGYHHAQRSR ASGFSYLNDA VVAINHLVQQ GKRVVYLDLD AHHGDGVQNA
FYQSDRVLSI SLHESGVYFF PGTGFERESG EGAGRGYSVN LPLLAHTDDA LFMKAFDEVA
FPLIAAFDPD VLFTQLGADT FRTDPLTRLE VTTHAYSYIL RKLRALQIPW VAVGGGGYDM
MNVARAWTIA WGVMNDRVLS PRLPASFVKL ISDLGYPHRM LLDAMHWAQE DDRNRALDAV
EKSIAYLRAQ IFPVLIGDYG TKRST
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