Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3103 |
Symbol | |
ID | 6779962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3591731 |
End bp | 3592186 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642769100 |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_002139901 |
Protein GI | 197119474 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00677478 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTCC TCGGCAGCGA TCACGGCGGC CTCGAGCTGA AGAACGAGAT CAAGAACCTC CTAGACCAGA GGGGGATTCC CTGCGAAGAC CTCGGCACCC ATAACGGCGA CTCCGTCGAC TACCCCGATT TCGGGGTGGC CGTGTCGCGC CGCGTCTCGG AAGGGAGCGC GGAGAAGGGT ATCCTGGTCT GCAGCACCGG AATCGGCATG TCCATCGTGG CCAACAAGTT CCCTGGAGTA CGCGCGGCAC TTGCCACGGA CGTCTTCATG GCGACCATGG CCAAGGAGCA CAACAACGCG AACATACTGG TGCTCGGCGG GCGCGTGCTG AAAACAGAAC TCGCCCGCGA GATGGTGGCC GCCTGGCTGG ACACCGCGTT CGCCGCGGGA AGGCACCAGG GGCGCCTGGA CAAGATCGCC GCAGTCGAAC GCCAACTGGG AACCAAGCTT TCCTGA
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Protein sequence | MIVLGSDHGG LELKNEIKNL LDQRGIPCED LGTHNGDSVD YPDFGVAVSR RVSEGSAEKG ILVCSTGIGM SIVANKFPGV RAALATDVFM ATMAKEHNNA NILVLGGRVL KTELAREMVA AWLDTAFAAG RHQGRLDKIA AVERQLGTKL S
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