Gene Gbem_3095 details

Gene Information

• Locus tag: Gbem_3095
• ID: 6779954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 3581624
• End bp: 3582322
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642769092
• Product: Pirin domain protein
• Protein accession: YP_002139893
• Protein GI: 197119466
• COG category: [R] General function prediction only
• COG ID: [COG1741] Pirin-related protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000217046
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACGA TCAGAAAATC TGAAGACAGA GGACATGCCG ATCACGGCTG GCTCAACACC 
TATCACAGCT TTTCCTTCGC CGGATACTAC GACCCGCGGC ACATGGGTTT CAGCAACCTC 
CGGGTCATAA ACGAAGACCG GGTGCAGCCG GGAGAGGGAT TCCCCACCCA CCCGCACCGG 
GACATGGAGA TCATCTCCTA CGTTCTCGAA GGGGCACTGG AGCATCGCGA CAGCATGGGA 
AACGGTTCCG TGATACGGCA GGGGGAAGTG CAAAGGATGA GCGCCGGCAC CGGCATCACC 
CACAGCGAGT TCAACCATTC CAAAGAAGAG GGCCTTCACT TCTTCCAGAT CTGGATTCTG 
CCGCAAAGCG AGGGGATCGC GCCGAGTTAC GAGCAGAAGC TCTTTCCGGA GCAGGAAAAA 
AGAGGAGCCT TGCGGCTCAT CGCCTCGGCA GACGGCGCCG AGGGTTCAAT CATCATCAAC 
CAGGACGCGA AGATGTACGC GACCGTTATC GATGGCGGTC AGGAAGTGGT GCACCACCTG 
GCGCGGGGGC GCCACGCGTG GGTTCAAGCG GCACGCGGCA GCGTCACCGT CAACGGCCAC 
CTGCTCGAAG CAGGAGACGG CGCGGCGGTA AGCGGTGAGG ACCTGGTGCG CCTGACGGCA 
AGGCAAAAAA GCGAGGTGCT GCTTTTCGAT CTGCCGTAA 

 

Protein sequence

MITIRKSEDR GHADHGWLNT YHSFSFAGYY DPRHMGFSNL RVINEDRVQP GEGFPTHPHR 
DMEIISYVLE GALEHRDSMG NGSVIRQGEV QRMSAGTGIT HSEFNHSKEE GLHFFQIWIL 
PQSEGIAPSY EQKLFPEQEK RGALRLIASA DGAEGSIIIN QDAKMYATVI DGGQEVVHHL 
ARGRHAWVQA ARGSVTVNGH LLEAGDGAAV SGEDLVRLTA RQKSEVLLFD LP