| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3092 |
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| Symbol | |
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| ID | 6779951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3577261 |
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| End bp | 3580731 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769089 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002139890 |
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| Protein GI | 197119463 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00110918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAA CAAATTTCGT TCACCTCCAT CTCCACTCCC AGTACTCGCT CCTCGACGGG
GCGATCCGCA TCGGTGACCT CCTGAAGAAG GTGAAGGAGT GCCACATGCC GGCCGTGGCC
ATGACCGACC ACGGCAACAT GTTCGGCACC CTTGAGTTCT ATTTGAAGTG CAAGGACAAA
GGGGTCAAGC CGATCCTGGG GAGCGAGGTG TACATAGCGC CTCAGGACAG GTTCTTGAAG
CAGGCTCCCT CCAGCCCCGG CCAGGCCTCC AGCTACCACC TGATCCTTTT GTGCGAAAAC
ATGACCGGCT TCAAGAACCT CTCCTATCTG GTATCCGCAG GATACAAGGA AGGGTTCTAC
CGCCGCCCCC GCATCGACAA GGAGCTCCTT CTGAAGCACA AGGAGGGGCT CATCGTCCTC
TCCGCCTGCC TGCAGGGGGA GGTGGCGTAC CTTGCCGGCA GGAACAAGAT GGACGAGGCG
CGCGCAGCGG CCTCCTGGTA CGCCGAGAAT TTCCCCGGTA GCTATTACAT CGAGCTGCAG
GAGAACAAGC TCCCGGAGCA GGACATCGCC AACCGCAGGC TCATGGAGAT CGCGCGTGAG
ATGGACCTGC CGCTCGTCGC CACCAACGAC TGCCATTACC TGAACCGCGA AGACGCGAGG
GCCCACGAGA TCCTCCTCTG CATCCAGACC GGCAAGACCA TGAGCGACCC GACCCACATG
GCGTTCTCCG TGGACGAGTT CTATGTGAAG ACGCCGCAGG AGATGGCGCA GGCGTTTCAT
TACGCCCCGG AGGCGATTGA GAACACGGTC AAGATCGCCG AGCGCTGCAA CCTCGAATTC
GACTTCAAGA CCTACTACTT CCCCGCCTAC GAGGCCCCTG AAGGGGAGAC GCTGGACCAG
CAGCTGGAGC GCGAGGCGAC CGTCGGCCTC GTCGAGCGGC TGAAAAAGAT CCGCATCAAG
TACAACTTGA CCGAAGAGCA GGAACAGGCC TACCACGCCC GTCTGCGCAT CGAGCTGGAC
TGCATCAAGC AGATGGGGTT CCCGGGCTAC TTCCTGATCG TCGCCGACTT CATCAACTGG
GCCAAAGACC ACGGCATCCC CGTCGGCCCG GGCAGGGGTT CCGCGGCGGG CTCTCTCGTC
GCCTTCTGCA TCAGGATCAC CGACATCGAT CCCATGCCGT ACAACCTCCT CTTCGAGCGC
TTCCTGAACC CGGAACGTAT CTCCATGCCT GATATCGACG TCGACTTCTG CCAGGATCGC
CGCGAAGAGG TGATCCAGTA CATGGTCGAG AAGTACGGCC GGGAGAAGGT CTGCCAGATC
ATCACCTTCG GTACCATGGC GGCGCGCGGC GTCATCCGCG ACGTCGGGCG CGCGCTCGAC
CTTACCTTCG GCGAGGTGGA CCGGATCGCG AAGCTGGTCC CCGAGGTGCT CGGCATCACG
CTGGATAAGG CGCTGGAGCA GGAGCCGAAG CTGAAGGAGC TGATGGCGGC CGACCCGAAG
GTGAAGGAGG TCATGACCGT CGCGCTCAGG CTGGAGGGGC TTGCCCGCCA TGCCTCTACG
CATGCGGCCG GCCTCGTGGT GGCACCCAGG CAGATGGAGG AATTCTGCCC GGTCTACAAG
GACCAGAAGA CCGGCTCCTT GACCACGCAG TACTCGATGA AGTACGTGGA GAAGATCGGC
CTGGTGAAGT TCGACTTCCT CGGGCTCAAG AACCTGACCG TTATCGACAA CGCCTGCAAG
CACATCAGAA ACGGCAAGGA CCCCAACTTC GACATCACGC TTTTGCGCGA CGACGACGAG
GAATCCTACA AGCTCCTGCA GGCCGGCAAC ACGACAGGCG TGTTCCAGCT GGAGTCCAGC
GGCATGAAGG AGCTCCTGGT CAAGTTGAAG CCCTCCTGCT TCGAGGACAT CATCGCGGTC
TGCGCCCTCT ACCGTCCGGG CCCCTTGGGC AGCGGCATGG TGGACGACTT CATCGAAAGA
AAGCACGGCC GCAAGCAGAC CGTCTACGAC CTGCCGCAGC TTGAGCCGGT CCTGAAAGAC
ACCTACGGCG TCATCGTCTA CCAGGAACAG GTCATGCAGA TCTCCCGATC GCTCGCCGGC
TACTCGCTTG GGGGCGCGGA CCTCCTGCGC CGCGCCATGG GTAAGAAGGA CGCCGAGCAG
ATGGCGAAGG AGCGCGACAA GTTCCTGGAG GGGTCCGAGA AGCTCGGCCT GGACGGGAAG
AAGTGCGCCG CCATCTTCGA CCTGATGGCG AAGTTCGCCG AGTACGGCTT CAACAAGTCG
CACTCGGCCG CCTACGCCCT GGTCGCCTAC CAGACCGCGT TCCTCAAGGC CCACTACCCG
GTCGAGTTCA TGGCTGCCCT CTTGACCGAG GACATGGGGA ACACCGACAA GGTCATTAAG
AGCATCGGCG ACTGCCGCGA GATGGGGATC GAGGTGCTCC CCCCCGACAT CAACGAGTCG
GACCGTTCCT TCCGCGTGCT GGACAAGGCG ATGCGCTTCG GTCTGGGCGC CGTGAAGAAC
GTGGGCGAAG GCGCCATCGA GGCGATCATC GAGGCGCGCG GCGACGAGCC TTTCAAGGAC
CTCTTCGATT TCTGCGAGCG CGTCGACCTG CGCCGGGTCA ACAAAAGGGT GATAGAGGCG
CTCATCAAGT GCGGCGCCTT CGACTGCACC GGGGCCAAAC GCTCCCAGCT CATGGCGGGG
CTGGAGGATG CCGCGTCCGC CGGGCAGAGG GTGCAGCAGG AGCGAGAGAG CGCTCAGGCG
TCGCTTTTCG GCGCGGCCGA GATCGTGCGC GGCGCCAACG GCGGCGGCAA CCGGCTTCCC
GAGATACCCG AGTGGGACGA GAAGTACCGG CTGGGGTGCG AGAAGGAGGC GATCGGCTTC
TTCATCACCG GGCATCCGCT GGACCGCTAC GTCGCCGACA TGAGGCGCTT CTCCAGCGTG
GACTGCTCCA CCATCCTGGA CGCCAAGGAA AAGAGCGAGG TGAGGATATG CGGCGTGCCG
GCCAGCGTCA AGGAGCTGAT CACCAAGAAA GGGGACCGGA TGGCCTTCCT CGCGCTGGAG
GACCTGGTGG GCTCGGTCGA GGTGGTGGTC TTTCCGGAAA CCTACGCCAA GTGCTCCGAG
GTGCTCAGGG GGGACGATCC CATCCACGTC ACCGGCACCG TTGAGCTGAG TGAGAAGGGG
GCCAAGGTGA TGGCGAGCGA CATCGTCCTT CTGCGCGACC TGGTTGAGCG TGAAACGAGG
AAGGTCAATT TCACCATAGA CGCCAAAGAG GTCGACGAAG GAAAGCTCAA AACGCTCAAA
GACATCATCT CCCGCTATCA GGGAATCTGT CGCAGCTTCC TGCACCTTGA CATAGAGAAC
AGCTCCAGAG TCACCATCAA GCTTCCCGAT GTATACAAAG TCTCGGCAAG TGAAGAATTA
ACAGTGGAAG TGAGCAACCT CTTCGGCTAT AATGCCGTGT CTTTCGAGTG A
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| Protein sequence | MDSTNFVHLH LHSQYSLLDG AIRIGDLLKK VKECHMPAVA MTDHGNMFGT LEFYLKCKDK
GVKPILGSEV YIAPQDRFLK QAPSSPGQAS SYHLILLCEN MTGFKNLSYL VSAGYKEGFY
RRPRIDKELL LKHKEGLIVL SACLQGEVAY LAGRNKMDEA RAAASWYAEN FPGSYYIELQ
ENKLPEQDIA NRRLMEIARE MDLPLVATND CHYLNREDAR AHEILLCIQT GKTMSDPTHM
AFSVDEFYVK TPQEMAQAFH YAPEAIENTV KIAERCNLEF DFKTYYFPAY EAPEGETLDQ
QLEREATVGL VERLKKIRIK YNLTEEQEQA YHARLRIELD CIKQMGFPGY FLIVADFINW
AKDHGIPVGP GRGSAAGSLV AFCIRITDID PMPYNLLFER FLNPERISMP DIDVDFCQDR
REEVIQYMVE KYGREKVCQI ITFGTMAARG VIRDVGRALD LTFGEVDRIA KLVPEVLGIT
LDKALEQEPK LKELMAADPK VKEVMTVALR LEGLARHAST HAAGLVVAPR QMEEFCPVYK
DQKTGSLTTQ YSMKYVEKIG LVKFDFLGLK NLTVIDNACK HIRNGKDPNF DITLLRDDDE
ESYKLLQAGN TTGVFQLESS GMKELLVKLK PSCFEDIIAV CALYRPGPLG SGMVDDFIER
KHGRKQTVYD LPQLEPVLKD TYGVIVYQEQ VMQISRSLAG YSLGGADLLR RAMGKKDAEQ
MAKERDKFLE GSEKLGLDGK KCAAIFDLMA KFAEYGFNKS HSAAYALVAY QTAFLKAHYP
VEFMAALLTE DMGNTDKVIK SIGDCREMGI EVLPPDINES DRSFRVLDKA MRFGLGAVKN
VGEGAIEAII EARGDEPFKD LFDFCERVDL RRVNKRVIEA LIKCGAFDCT GAKRSQLMAG
LEDAASAGQR VQQERESAQA SLFGAAEIVR GANGGGNRLP EIPEWDEKYR LGCEKEAIGF
FITGHPLDRY VADMRRFSSV DCSTILDAKE KSEVRICGVP ASVKELITKK GDRMAFLALE
DLVGSVEVVV FPETYAKCSE VLRGDDPIHV TGTVELSEKG AKVMASDIVL LRDLVERETR
KVNFTIDAKE VDEGKLKTLK DIISRYQGIC RSFLHLDIEN SSRVTIKLPD VYKVSASEEL
TVEVSNLFGY NAVSFE
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