Gene Gbem_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3079 
Symbol 
ID6779936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3562010 
End bp3564097 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content55% 
IMG OID642769074 
Productglutamine synthetase catalytic region 
Protein accessionYP_002139877 
Protein GI197119450 
COG category[R] General function prediction only 
COG ID[COG3968] Uncharacterized protein related to glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0136048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGATGT TTGGGCAAAA CGTATTTAAC CAGTCCGTTA TGAGAGATAG GTTGCCGAAA 
AGTGTTTTCA AGAACCTCAA GAAAACCATT GACGAAGGTC TGCCGCTTGA TCCCTCTATT
GCAGATGTTG TCGCATCGGC AATGAAAGAG TGGGCCGTTG AAAGAGGCGC AACGCACTTC
ACCCATTGGT TCCAGCCGAT GACCGGCATT ACCGCGGAGA AACATGACTC TTTTATTTCG
CCGACGGATG GCGGGGTACT GCTTGAATTC TCCGGTAAAG AACTGGTCAA GGGTGAGCCG
GATGCGTCCT CTTTCCCCAG CGGCGGCCTG AGGGCAACCT TCGAAGCCAG GGGATACACC
GCCTGGGACT GCACCTCGCC TGCCTTCCTG AGAGAAGAGG CTGACGTCAT CACTCTCTGC
ATCCCTACCG CCTTCTGCTC CTACACCGGT GAGGCGCTGG ACAAGAAGGT TCCTCTGCTT
CGTTCCATGG AAGCGCTTTC CACGCAGGCC GTTCGCGTTC TCAAGCTGTT CGGAAACACC
AGTGTCACCA GGGTAACCTC GACTGTCGGA GCCGAGCAGG AATACTTCCT GGTGGACAAG
TCTTTCTACC TGAAAAGACC CGACCTGATG ATGGCAGGCA GAACCCTTTT CGGCGCCATG
TCCACAAAAG GGCAGGAAAT GGAAGACCAC TACTTCGGCA GTATCAAGGA AAGAGTGCTG
TCGTACATGA AGGAAGTGAA CGAGGAACTG TGGAAACTGG GCGTTACCGC CAAGACCCAG
CACAACGAAG TAGCACCCGG ACAGTTTGAA CTTGCTCCGA TCTTCGAAAA CACCAACATC
GCCACCGACC ACAACCAGAT GGTCATGGAA GTTCTCAAGC GGGTCGCCCT CAGGCACGAC
ATGGTCTGCC TGCTGCACGA GAAACCCTTT GCCGGCGTCA ATGGTTCCGG AAAGCACAAC
AACTGGTCCA TGAGTTCCAA CGACGGCCAG AACCTGCTGG AGCCCGGCCA CACCCCCCAT
GAAAATGCCC AGTTCCTGAC CTTCCTCATG GCGACCATCA AGGCTGTGGA CACCTATGCC
GGGCTGCTGC GCTGCTCCTG CGCCAACGCC GGCAATGACC ATCGCCTGGG CGCCAATGAA
GCACCTCCGG CGATCATTTC GGTTTTCCTC GGCGAGCAGC TTGCCGACAT CATCGACCAG
ATCGTTGCGG GCGTAGCAAA ATCGTCCTCC ATGAGCGGTC ACATGGACAT CGGCGTAAAT
ACCCTTCCCT CGCTGCCCAA GGACGCCACC GACAGGAACA GGACCTCCCC GTTCGCCTTT
ACCGGCAACA AGTTCGAATT CAGGATGCTC GGTTCTTCCT TCTCCATTTC GGGCCCCAAC
ATCATCATCA ACACCATCAT TGCCGAGGCG CTGAAGGAGT TTGCCGACGT GCTGGAGAAA
TCCACCAACT TCGACGCCGA CCTCGACAAG CTGCTTCAGA AAACCGCGAA AAAACACCAG
CGTGTGATCT TTAACGGCAA CAACTACTCC GACGAGTGGG TTCAGGAAGC AGCGAAACGT
GGCCTGCCGA ACATTCCCAA CACTCCTGAC GCACTCAAGG AGCTGGTCTC CAAGGAAGCG
GTCAAGGTGT TCGCTGCTCA CAATGTCTTC AACGAAAAGG AAGTTCATGC ACGTTACGAA
ATCATGGTCG AGCAGTACAT CAAGACCCTG AACATCGAAG CGCTGACCAT GATAGACATG
GCCAACCACA GCATAATCCC CACCGCCATT GAGTATGCGA CAGCAGTGGC AAACTCTGTC
AATGCGGTCG CCGCTGTATC CAGCAAGCTG GACGTCTCGA CACAGAAGGA ATTGCTGGAT
GAACTCTGCG AGAAACTGGC TTCGATGAGC GCCAATACCA AAGCGCTGGA GCAGGCGCTT
GAGAACGCGC TGAACATCGC CGATGCCGAG AAGCAGGCCG CCGCATTCAG GGAAAACGTG
TTTACCAAAA TGTTTGAACT GCGTGCCACT GGCGATGCGC TGGAAAAAAT CATAGGTGCC
AAGTACTGGC CTCTGCCGAC CTACAGGGAG ATGCTTTTCG TTCTGTAA
 
Protein sequence
MEMFGQNVFN QSVMRDRLPK SVFKNLKKTI DEGLPLDPSI ADVVASAMKE WAVERGATHF 
THWFQPMTGI TAEKHDSFIS PTDGGVLLEF SGKELVKGEP DASSFPSGGL RATFEARGYT
AWDCTSPAFL REEADVITLC IPTAFCSYTG EALDKKVPLL RSMEALSTQA VRVLKLFGNT
SVTRVTSTVG AEQEYFLVDK SFYLKRPDLM MAGRTLFGAM STKGQEMEDH YFGSIKERVL
SYMKEVNEEL WKLGVTAKTQ HNEVAPGQFE LAPIFENTNI ATDHNQMVME VLKRVALRHD
MVCLLHEKPF AGVNGSGKHN NWSMSSNDGQ NLLEPGHTPH ENAQFLTFLM ATIKAVDTYA
GLLRCSCANA GNDHRLGANE APPAIISVFL GEQLADIIDQ IVAGVAKSSS MSGHMDIGVN
TLPSLPKDAT DRNRTSPFAF TGNKFEFRML GSSFSISGPN IIINTIIAEA LKEFADVLEK
STNFDADLDK LLQKTAKKHQ RVIFNGNNYS DEWVQEAAKR GLPNIPNTPD ALKELVSKEA
VKVFAAHNVF NEKEVHARYE IMVEQYIKTL NIEALTMIDM ANHSIIPTAI EYATAVANSV
NAVAAVSSKL DVSTQKELLD ELCEKLASMS ANTKALEQAL ENALNIADAE KQAAAFRENV
FTKMFELRAT GDALEKIIGA KYWPLPTYRE MLFVL