| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3069 |
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| Symbol | |
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| ID | 6779925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3554429 |
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| End bp | 3555739 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642769063 |
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| Product | integrase family protein |
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| Protein accession | YP_002139867 |
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| Protein GI | 197119440 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGA AGAAAGGCAA TCTGGCCATC GAGACACCAG CCAAGGAAAC CGGAGCCATC
AAGAGGCGTA AAGGCTCTAA AAAGCTCTAC GTCGATTTCT ACTACTTCGG CCACCGGATC
ACCCGATCAA CGGAACTTGA CGACACCCCA GCCAATGAAA GGAAGGTTCG CGCCTTCCTC
AACAGGATCA CGGAGCGGAT CGAGAACGGA ACCTTCAAAT TTGCCGAAGC GTTCCCCGGC
TCCTCAGATC AGGAAAAGGC ATATTTCACC CAAAAGGAAG GCAGGGAGTA CCGACCTGAA
CCGCATCAGG TGTTATTCGG CGACTACGCC AAAGAGTGGA TGCTGACCAT TTACCCCACT
TTCGGCTCAC CGACCAAGCG GAACGATTAC AAGGAAGCTC TTGAATCGCG TATCCTGCCC
CACTTCAAGA ACTTCACCTT TTACCAGCTC ACCAGCATGG AGCTTTTCAA ATTCACTGAG
TCGCTGGTAA GGCAAAAAGG GAAGGACAAA GGGAAGCCGC TTTCAACGGC TCGAAAGGTT
AATCTGCTGA TACCCTTCCG GGCCATCTGG AACGATGCCT GCGATCATTA CCGCTGGGTA
CTGAAAAGCC CCTTCGACAA CCTGAAAAAG AAGCTGCCGA AGACTGAGAA GAAAGAGCAC
ACCGTCATAA GGCTTCATGA CTGGCTCAAG TTCCTTGATA ACCTTGAAGA CCATTACCGA
CCCATTGCGG AAATGATGAT CCTTACCGGG ATGATCCCTT CCGAGCTGGG AGGCCTGAAG
CGGGAAGACA TTGAAGGAGA CTACATCAAC GTCAGAAGCT CCTATGTCCT CGGGGAAGAA
AAGAAGAGCC TCAAGACCGC TTTTAGGAAG AGGCAAATCT TCATCACCCA AGCCATCAGG
GAACGGCTAC AGATCATCCT TGACCGTTCC TCTTCCCCCT ACGTCTTCAT CATGGAGGAC
GGGAAGAGAT TCAACAGCAG CCGCTTCAGC AAACTCTGGC AGAAGGCCGT ATTAACGGCG
GGAATACCGT ATGTCACATC CTACTCTGCC CGTCACTCCT TCGCTGCCTG GAGCCTCATT
ATCGGCGTTA ATCCGCTGAG GCTGGTAAAC CTGATGGGAC ATGCCAGCAA ACAGATGGTC
TATGAGGTGT ACGGGAATTA CGTTGAAGGC CTGGAGGACG ACGCGGAGGA AATGCTTGAT
TACTTCGGGC GCGACTTCGT GCTACCCCGG AAAAAGAAAT CCCCGGTTCC GTTTAGGGAC
AGTACCGGGG ACAGTCTTGG AAGTTCCGTT CTAACTACTG GAACCATTTA G
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| Protein sequence | MRMKKGNLAI ETPAKETGAI KRRKGSKKLY VDFYYFGHRI TRSTELDDTP ANERKVRAFL
NRITERIENG TFKFAEAFPG SSDQEKAYFT QKEGREYRPE PHQVLFGDYA KEWMLTIYPT
FGSPTKRNDY KEALESRILP HFKNFTFYQL TSMELFKFTE SLVRQKGKDK GKPLSTARKV
NLLIPFRAIW NDACDHYRWV LKSPFDNLKK KLPKTEKKEH TVIRLHDWLK FLDNLEDHYR
PIAEMMILTG MIPSELGGLK REDIEGDYIN VRSSYVLGEE KKSLKTAFRK RQIFITQAIR
ERLQIILDRS SSPYVFIMED GKRFNSSRFS KLWQKAVLTA GIPYVTSYSA RHSFAAWSLI
IGVNPLRLVN LMGHASKQMV YEVYGNYVEG LEDDAEEMLD YFGRDFVLPR KKKSPVPFRD
STGDSLGSSV LTTGTI
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