| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3061 |
|---|
| Symbol | |
|---|
| ID | 6779917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3548206 |
|---|
| End bp | 3548694 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642769055 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_002139859 |
|---|
| Protein GI | 197119432 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.325314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTTA GCGTTGGAGT CGAATATGCC CTGCATTCCC TGTTTTACCT GGTTAATGTC
CCCGAGGGGA AAACGGTAGG GATAAGGCAC TTGGCGGAAT TGCATGGGAG CACTGACAGT
TACTTGTCCA AGATTTTTGC TAAGTTAAGG AAAACCGGCA TCGTCCGATC AGTCTCTGGA
GTAAAAGGCG GATATGAACT TGCCAGGCTG CCGGAAGCCA TCTCTTTTTG GGATATCATC
GAAGCTGTAG AAGGGCCGTC CTATTTCTTC CAATGCAATG AGATGAGGAA AAAGAATATT
TTCGTTTCCG ACCCCTCCAT CTTTACCGAC AGATGCCCCT GCCTTATCAA AGTGGTCATA
CAGGACGCCG AGAATGTATT TCGAAACGAA CTACGTAACA AGTCCTTACG TTGGCTGTGG
GATCAGGCGC AAAAGGATTT TTCAGAGGAA AGAAAGCTCG CGATCCGCAC ATGGACAGCC
AATCTGTAA
|
|---|
| Protein sequence | MQFSVGVEYA LHSLFYLVNV PEGKTVGIRH LAELHGSTDS YLSKIFAKLR KTGIVRSVSG
VKGGYELARL PEAISFWDII EAVEGPSYFF QCNEMRKKNI FVSDPSIFTD RCPCLIKVVI
QDAENVFRNE LRNKSLRWLW DQAQKDFSEE RKLAIRTWTA NL
|
|---|
| |