Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3048 |
Symbol | |
ID | 6779904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3516900 |
End bp | 3517388 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642769042 |
Product | hypothetical protein |
Protein accession | YP_002139846 |
Protein GI | 197119419 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TGCTTGTTGC GGTGCTGCTG GCTTTAATTG GTGTCGGTTG CTCGACCGGC GGCGGAACGG TCGGCGCGCG GGGAAGTGAT TCGAAGGACT CGGTCCTGTT CGAAATAGCG GCGGACCCTC AACTGAACCG CTATGAGAAA AACTCACATG CGCTCGTGCT TTGCCTCTAC CAGTTAAGCG ATGCCGACAG CTTCACGCGG CTGGCCCAGG GAACCGAGGG GATGCCGAAA CTTCTTGAAT GCGGCAGGTT CGACGGGACG GTGGTGCACG TACGGCAGGT GGTGGTGCAG CCTGGGCAGG AACTGAAAGA GATTGCCGAG AGGGGAAACG GCGCACGGTA CCTCGGAATA GCTACCGGCT ACTACAGCAC AGGCAAAAAG AAGATGACCG CGCTCGCGAC GATTCCGGAG GACCAGAGGG AGAGCGTGCT CCGTATCGAA CTGGGGGCAC AGGAAATAGG ACAGGTGAGG GTGAAATGA
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Protein sequence | MKRMLVAVLL ALIGVGCSTG GGTVGARGSD SKDSVLFEIA ADPQLNRYEK NSHALVLCLY QLSDADSFTR LAQGTEGMPK LLECGRFDGT VVHVRQVVVQ PGQELKEIAE RGNGARYLGI ATGYYSTGKK KMTALATIPE DQRESVLRIE LGAQEIGQVR VK
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