Gene Gbem_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3048 
Symbol 
ID6779904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3516900 
End bp3517388 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID642769042 
Producthypothetical protein 
Protein accessionYP_002139846 
Protein GI197119419 
COG category 
COG ID 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TGCTTGTTGC GGTGCTGCTG GCTTTAATTG GTGTCGGTTG CTCGACCGGC 
GGCGGAACGG TCGGCGCGCG GGGAAGTGAT TCGAAGGACT CGGTCCTGTT CGAAATAGCG
GCGGACCCTC AACTGAACCG CTATGAGAAA AACTCACATG CGCTCGTGCT TTGCCTCTAC
CAGTTAAGCG ATGCCGACAG CTTCACGCGG CTGGCCCAGG GAACCGAGGG GATGCCGAAA
CTTCTTGAAT GCGGCAGGTT CGACGGGACG GTGGTGCACG TACGGCAGGT GGTGGTGCAG
CCTGGGCAGG AACTGAAAGA GATTGCCGAG AGGGGAAACG GCGCACGGTA CCTCGGAATA
GCTACCGGCT ACTACAGCAC AGGCAAAAAG AAGATGACCG CGCTCGCGAC GATTCCGGAG
GACCAGAGGG AGAGCGTGCT CCGTATCGAA CTGGGGGCAC AGGAAATAGG ACAGGTGAGG
GTGAAATGA
 
Protein sequence
MKRMLVAVLL ALIGVGCSTG GGTVGARGSD SKDSVLFEIA ADPQLNRYEK NSHALVLCLY 
QLSDADSFTR LAQGTEGMPK LLECGRFDGT VVHVRQVVVQ PGQELKEIAE RGNGARYLGI
ATGYYSTGKK KMTALATIPE DQRESVLRIE LGAQEIGQVR VK