| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3044 |
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| Symbol | |
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| ID | 6779900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3510082 |
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| End bp | 3511401 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769038 |
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| Product | type VI secretion-associated protein, ImpA family |
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| Protein accession | YP_002139842 |
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| Protein GI | 197119415 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family
[TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACG TAACAGTGGA CGAACTGCTG GCCCCCATCA GCACGGAAGC GCCGGCGGGA
AGCGATCTGC GCTACACAAC CTTCTACGAG GAGATAATGG AGGCCCGCAG AAGCGATGAT
GCCGTAGCGC TCGGGGACTG GCGCCATGAT GTAAAGGCTG CCGACTGGAA CAAGGTGATC
AAGCTCTGCG TCGCCGCCCT TTCCACCAAG AGCAAAGACC TGCAGATAGC GGTCTGGCTT
TGCGAGTCGC TTATCGTGGT CGACGGTTTT CCCGGTTTGG ATGCGGGGTT GCGCCTGCTC
AAGGAACTGA TGGGAAGATA CTGGGATTGC TTTTACCCGG TAAGCGGGGA CGAGGACCTG
GAATACCGGG CAGCTCCGTT GGACTTTCTG AACGAGAAGG TGGCCACGCA GCTAAAAAGG
ATCCCTCTCA CTGACCCTTT GGTGACGCCG GGTTACTCCT GTCTCAAATG GGAGGAGTCC
CGCCGTGTCG GCTATGAGGC CGAGACCAGG AACAGTTACG GCGAAGTGGA GGAGGAATGG
AAGCAGCGCC GGGATGCGCG CATTTCGGAG GGAGGGCTCA CCGCCGAGGA ATTCGATGCC
GCAGTGGAAA AATCTCGCGG CACCTTTTCA GAGCAGCTTC TGGAAAGCCT CAAACGCTGC
GAAGAGAGCC TGCAGGGGCT GGAATGGGGG GTCGAGGCGA AGTGGTTCCC CGCGCCGGCA
CCGAGCCTGG CCGCTTTGGG GGCGGCCATG AACAGTTGCC AGATGCTGGC AAGGAAGTGC
TACGGCGTCG AATCTCCTCC CCAGGCAAAT GAGCCTGAAG CAAAAGGCAG CGAAGTACAG
GGGACGGAAG AGAAGGAAAC AGCAGAGGTG GCGCCGCCGG CGCTCAGGCA GCCAGACGGC
ATCGCCGGCG TATCCCGTCC CGGCGCTGCG CAGCAACAGG AGAGCTCGCT TTGGGGTGAA
GGGCTCGCCC TGCTGGAGGC GGGACATCTC GAACAGGCGC TGACCATGCT GCTTTACACC
AGCAACAGCT GCGAATCCAC CAGAGACCGC AACCGGATCC GCCTCCTGAT GGTGAAGCTC
TGCCTGAAAG CAGGAAGGGG GGATCTGGCC AGGCCGATAG TGGAGGAGTT GCACGACATG
ATCGAGGAGT TGAAGCTGGA GCGTTGGGAG TCGCCGGTGT GGATCGCGGA GGTACTGCAC
GCCTACTACC AGTGCCTGCA GGCGGGCGAG CTTCCGGATG AAGACCTAAC CTTGTCGCGG
GTCCTGTTCA AACGGATCTG TTCCCTCGAC GTCACCAAGG GGATCCCTTA CCGGATCTGA
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| Protein sequence | MQDVTVDELL APISTEAPAG SDLRYTTFYE EIMEARRSDD AVALGDWRHD VKAADWNKVI
KLCVAALSTK SKDLQIAVWL CESLIVVDGF PGLDAGLRLL KELMGRYWDC FYPVSGDEDL
EYRAAPLDFL NEKVATQLKR IPLTDPLVTP GYSCLKWEES RRVGYEAETR NSYGEVEEEW
KQRRDARISE GGLTAEEFDA AVEKSRGTFS EQLLESLKRC EESLQGLEWG VEAKWFPAPA
PSLAALGAAM NSCQMLARKC YGVESPPQAN EPEAKGSEVQ GTEEKETAEV APPALRQPDG
IAGVSRPGAA QQQESSLWGE GLALLEAGHL EQALTMLLYT SNSCESTRDR NRIRLLMVKL
CLKAGRGDLA RPIVEELHDM IEELKLERWE SPVWIAEVLH AYYQCLQAGE LPDEDLTLSR
VLFKRICSLD VTKGIPYRI
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