Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3042 |
Symbol | |
ID | 6779898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3508028 |
End bp | 3509515 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642769036 |
Product | type VI secretion protein, EvpB/VC_A0108 family |
Protein accession | YP_002139840 |
Protein GI | 197119413 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAGC AAGATAGGGA ACCGGAAGTA CTGTACGCGG AGCCGCTACC TGCGGGAGGC CTGCTGGAGC TGATAATCCA GGAAGGGCGA CTTGCCCGCG GCGTCTGTCG CCGTGAGCAT GCAGTGGACC TTGTGGGCGA ACTGGCGCAG CAGGTCCTTG AGGGGGGGAT GACGGTGAGC CGCGACACGG AACAGATGAT CAACCAGAGG ATCGCCCAAC TGGACGCGCT CATCTCCGCG CAGGTTAACG AGATCATCCA CCATCCCGAA TTCCAGAGGT TGGAAGCCTC CTGGCGCGGC CTTGACCATC TCGTGCACCA AAGCGAGACT GGAGCCAACC TGAAGATCAG GGTTCTGAAC GTCTCGCGCC GGGACCTAGT GCAGGACATG GAGAAAGCGG CAGAGTTCGA TCAGTCCGCC CTGTTCAAGA AGGTGTACGA GGAGGAGTTC GGCAGCTACG GCGGGGCTTC CTACGGTTGC CTGGTGGGTG ACTTCGAATT CGGCAACACG CCGCAGGATC TTTCGCTTTT GACACGGATA TCCGAGGTCG CGGCTGCCGC GCACGCACCG TTATTGACCG CAGCGTCTCC TTCCCTGTTC AACATGGAGA CCTTCGGCGA ACTCGACCGG CCCAGGGACT TGGCCAAGAT CTTTCAAGGG CCGGAATACG CCAAGTGGAA ATCCTTCCGC ATCTCGGAGG ACGCCCGTTA CGTGGCCCTT TGCCTCCCCC GGGTGCTGAT GCGGCTCCCC TACGGACCCG ACGCCGATCC GGCTGAACTA TTCCAGTTCA ATGAGGATGT GGACGGCACC GAACACGGCA ATTATCTCTG GGGCAATGCA GCCTATTGTC TGGCCGAACG GGTGACCGAA GCTTTCGCGA AATACGGCTG GACCGCGGCG ATCAGGGGAG TGGAAGGTGG CGGTCTTGTG AGCGACCTGC CGGTGCACTG CTTCAAAACG GGGGAAGGGG AAGTAGCCCA CAAGTGCCCG GCTGAGATTG CCATCACCGA CCGGCGCGAA AAGGAGCTGG CGGACCTGGG CTTCATCCCG CTGGTCCATT GCAAAGGGAC CGACAACGCC GCGTTCTTCA GCGCCCAAAG CGCACACCGT CCCAAGAGCT ACGACTCCGA TGCGGCCAAC GCGAACGCAA GGCTCTCGGC GCAGTTGCAG TACATTCTCG CCGTCTCGCG ATTCGCGCAT TACCTGAAGG CGCTGATGCG CGACAAGGTC GGCAGCTTCG ACACCAGGAA GAACGTGGAG GACTACCTCA ACCGCTGGAT CAGCAACTAC GTGCTTCTGG ACGACGACGC CGGCCAGGAG ATGAAATCGC GCTACCCACT GCGGGAGGCC CGGGTGGAGG TTTTCGAAGA TCCCGCCAAG CCCGGTGCCT ACCGCGCCGT CGCTTTTTTG AAGCCGCACT TCCAGCTTGA CGAACTTACC GTCTCGCTGA GGCTTGTGGC CAGCCTGCCG GCACCGGCAA GAGAATAA
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Protein sequence | MGEQDREPEV LYAEPLPAGG LLELIIQEGR LARGVCRREH AVDLVGELAQ QVLEGGMTVS RDTEQMINQR IAQLDALISA QVNEIIHHPE FQRLEASWRG LDHLVHQSET GANLKIRVLN VSRRDLVQDM EKAAEFDQSA LFKKVYEEEF GSYGGASYGC LVGDFEFGNT PQDLSLLTRI SEVAAAAHAP LLTAASPSLF NMETFGELDR PRDLAKIFQG PEYAKWKSFR ISEDARYVAL CLPRVLMRLP YGPDADPAEL FQFNEDVDGT EHGNYLWGNA AYCLAERVTE AFAKYGWTAA IRGVEGGGLV SDLPVHCFKT GEGEVAHKCP AEIAITDRRE KELADLGFIP LVHCKGTDNA AFFSAQSAHR PKSYDSDAAN ANARLSAQLQ YILAVSRFAH YLKALMRDKV GSFDTRKNVE DYLNRWISNY VLLDDDAGQE MKSRYPLREA RVEVFEDPAK PGAYRAVAFL KPHFQLDELT VSLRLVASLP APARE
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