Gene Gbem_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3022 
Symbol 
ID6779878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3489667 
End bp3490869 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID642769016 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002139820 
Protein GI197119393 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.225515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTG CAAGCATAGA GGAAGCGATT GAGGAGATCA GGGCCGGCAG GATGGTCATC 
CTCGCGGACG ACGAGGACCG CGAAAACGAA GGCGACCTCA CCATGGCGGC CCAGTGCGTG
ACGCCTGAGG CCATCAACTT CATGGCGAAG TATGGCCGCG GCTTGATCTG CCTCACCATG
ACCTCGGAGC GTTGCGACCG CCTCGACCTG CAGCCGATGG TGCAGACCAA CACCTCATCC
TTCGGCACCG CTTTCACCGT TTCCATCGAA GCGAAGAAGG GCGTTACCAC CGGCATCTCG
GCGGCGGACC GCGCCCATAC CATACTTACC GCCGTGGCAC CCGACGCCAC TGCTGCGGAC
CTGGCGCGGC CGGGCCACAT CTTCCCGCTC AGGGCCCGCA ACGGCGGCGT CCTGGTGCGC
TCCGGGCAGA CCGAAGGCTC GGTCGACCTG GCGCGTCTCG CCGGGGTGGA GCCTGCCGGC
GTCATCTGCG AGATCATGAA CGACGACGGC ACCATGTCGC GCATGCCCGA ATTGAAGAAG
TTCGCCAAGG AGCACGGCAT CAAGGTCTGC ACCGTCGCAG ATCTCGTCGC CTACCGCCTC
AAGCACGAAT CGCTGGTGCG CCGCTCGGTC GACGTGGCGC TCCCGAGCCA ATACGGCAGC
TTCCGCGCCG TTGCCTTCGA GAACGACATC GACAAGCTTG AGCACCTGGC CCTGGTCAAA
GGGGACATCA AAGGCGACGA GCCGGTATTG GTGCGGGTCC ATTCCGAATG CCTCACCGGG
GACGTCTTCG GCAGCGTCAG GTGCGACTGC GCCGATCAGC TGCACAGCGC CATGGAGCGG
ATCGAGAAGG AAGGAACGGG AGTAATCCTT TACATGCGCC AGGAAGGGCG CGGCATCGGG
CTCACCAACA AGCTCAAAGC GTACGCACTG CAGGACCAGG GGCACGACAC GGTGGAGGCC
AACCTCGCCC TCGGCTTCAA GGCGGACTTG AGGGACTACG GCATCGGCGC GCAGATCCTG
GTGAACCTGG GCGTGAAGAA GATTCGTCTC ATGACCAACA ACCCGAAGAA ACTCATCGGC
CTTCAGGGGT ACGGCATCAA CATCGTCGAG CGTGTTCCCA TCGAGATCGC GGCTTCCAAA
AGCAACGAGA AATACCTGAA GACCAAGCGC GAGAAGATGG GACACCTGCT GGAAAACATT
TGA
 
Protein sequence
MSVASIEEAI EEIRAGRMVI LADDEDRENE GDLTMAAQCV TPEAINFMAK YGRGLICLTM 
TSERCDRLDL QPMVQTNTSS FGTAFTVSIE AKKGVTTGIS AADRAHTILT AVAPDATAAD
LARPGHIFPL RARNGGVLVR SGQTEGSVDL ARLAGVEPAG VICEIMNDDG TMSRMPELKK
FAKEHGIKVC TVADLVAYRL KHESLVRRSV DVALPSQYGS FRAVAFENDI DKLEHLALVK
GDIKGDEPVL VRVHSECLTG DVFGSVRCDC ADQLHSAMER IEKEGTGVIL YMRQEGRGIG
LTNKLKAYAL QDQGHDTVEA NLALGFKADL RDYGIGAQIL VNLGVKKIRL MTNNPKKLIG
LQGYGINIVE RVPIEIAASK SNEKYLKTKR EKMGHLLENI