Gene Gbem_3008 details

Gene Information

• Locus tag: Gbem_3008
• Symbol: smpB
• ID: 6779864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 3476519
• End bp: 3476998
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642769003
• Product: SsrA-binding protein
• Protein accession: YP_002139807
• Protein GI: 197119380
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGAAC ACGAGAAGTT GATCTGCAAC AACAAGAAGG CCTTCCACGA TTACTTCATC 
GAGGAGCGTT ACGAGGCCGG GATGGTGCTG CAGGGGACCG AGGTGAAGTC CCTGCGTAAC 
GGCAAGGCCA ACCTGAACGA CTCCTTTGCT ATGGTGAAAA ACGGCGAAGC CTTCCTGCAC 
AACTTTCACA TCAACCCATA CGACTTTGGG AACCGGGAGA ACCACGATCC GGACCGGATG 
AGGAAGCTTT TGTTGCACAA GAAAGAGATC GTGAAGCTTT TTGCCAAGAT ACGCGAGCAG 
GGGTACACGC TGATACCCTT GAGGGTTTAC TTCAAAGAAG GCAAAGTCAA AGCCGAATTG 
GGGTTAGCCA AAGGCAAGAA GAACTACGAC AAGCGTGAAG TCATGAAAGA AAAAGACATG 
CAGCGCGACA TAGCCCAGGG GCTGAAAGAC AGAAACAGAG GTGCTAGAGA CAGGGATTAA 

 

Protein sequence

MGEHEKLICN NKKAFHDYFI EERYEAGMVL QGTEVKSLRN GKANLNDSFA MVKNGEAFLH 
NFHINPYDFG NRENHDPDRM RKLLLHKKEI VKLFAKIREQ GYTLIPLRVY FKEGKVKAEL 
GLAKGKKNYD KREVMKEKDM QRDIAQGLKD RNRGARDRD