Gene Gbem_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3000 
Symbol 
ID6779855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp3468214 
End bp3468807 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content58% 
IMG OID642768995 
ProductResolvase domain 
Protein accessionYP_002139799 
Protein GI197119372 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTA AACTATATAT AGCCTACTAC CGCGTATCCA CCGACAAGCA GGGCGAACGC 
GGCCTCGGCA TCCAGGCGCA GAGGGATGCT GTCACGAGGT TCATCGAGCG CCAGGAAGGG 
GCTGTGCTTT ACGCCTGTTT CACCGAGGTC GAATCAGGCA CCAAGAAAGG CAACCGCCCA 
GGTCTTGCCG ACGCTCTAGC TTTGGTCAGG AAGGTCAAAG GCACGCTCCT CATAGCCAAG 
CTCGACCGTC TGGCCAGGAA CGTCCGGTTC ATCGCAACGC TGATGGAGGA GAACCCCGAC 
TTCATCGCCC TGGACTTTCC CGAGTCACAG CCGGTCATCC TCCACGTCAT GGCCAGCTTC 
GCCGAGCACG AGGCGCGGGT GATCGCCGCC CGGACCTCAG CCGCGATCCA GGCCCGACTC 
AAAGACCCCG ACTACCGCAA CTCCAAAGGT GCAAGATGGG GCAATCCCCA GTGCCTGAAC 
CCCAAGTACA AGTCGCTGTC GAAGAGTGAA GCAGCAGCCG CACGTAGAAA AGACGCAGTG 
GACTTTGCGA AAAAACTGGA GCCAATTATT AAATTTTACT TGCAGGACCG TTAA
 
Protein sequence
MTPKLYIAYY RVSTDKQGER GLGIQAQRDA VTRFIERQEG AVLYACFTEV ESGTKKGNRP 
GLADALALVR KVKGTLLIAK LDRLARNVRF IATLMEENPD FIALDFPESQ PVILHVMASF 
AEHEARVIAA RTSAAIQARL KDPDYRNSKG ARWGNPQCLN PKYKSLSKSE AAAARRKDAV 
DFAKKLEPII KFYLQDR