| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2984 |
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| Symbol | |
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| ID | 6779838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3452190 |
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| End bp | 3453851 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768979 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_002139783 |
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| Protein GI | 197119356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTC CGCTGTACGA CCGCATCCGG CCAGATGAAT CGCGCCGACG CGACCTCCTG
ATATTAACCC TCGTATTTGG GCTGCTCTTT CTTCAGTTTC TGGGCCACTC CCCGCTCATC
GACCCCGACG AAACCCGCTA CGCAGAAATC CCCCGCGAGA TGCTGGAACG CGGCGACCTG
ATCACTCCGC TGCTCAATTA CGTTAAATAT TTCGAAAAGC CAGTGCTTCT ATACTGGTTG
AACGCACTAT CATTCTCCAT GTTCGGCATC GGCGAATTTT CTGCCCGGCT CGCCTGCGCG
TTGAGCGGCC TCGGCACGGT GCTGTTCAGC TACCACCTGG GGCGCGAACT CTTCGGGCGC
CGCGTCGGCC TGCTGAGCGC CCTGGTCCTT GGCTGCTGCA CCGGCTTCCT CATCCAGAGC
CGGATGAACA TCACCGACAT CCCGCTCACC TTCACCATGA CGGCGGCGCT TGGGAGCTAC
ATACTGGCCG CCCGGGAAGC CGAGCGCCCC AAAGCCGGCT ACTATTACCT TTTCTACCTC
TTCGCCGCCC TGGCGGTCCT CGCCAAAGGG CTCATCGGCA TGGTCCTTCC CGGCGCGGTT
ATCTTCTGGC ATATCGTGCT CACACGTCGC TGGCGGATCC TGAAAGAGAT GCGCCTTTTC
ACCGGGCTGA TCCTCTTTTT CGCGGTCGCG GCCCCCTGGT TCGTGCTGGT GTGCCGGGAC
AACCCGGAGT TCTTCCAGTT CTTCTTCATT CACGAGCATT TCGAGCGCTT CCTGACCACG
GTGCATCACC GTTACCAGCC GTTTTGGTAC TTCATCCCCA TCCTCTTCGG CTTCATGATC
CCCTGGTCCT TCTTCATCCC GGCGGCGTTG CGCGGCTTCT GGCGCGAGCG CACCCTCCCC
GGCGGGGAGG CGCGCCTATA CCTCGCGCTG TGGGCGATCA TCATCTTCGT GTTTTTTTCG
AAGTCGAACT CGAAGCTGCC TGCCTACATC CTGCCGGTCT ACCCGGCCCT CGCCATACTC
ATCGGCGCGC TGTTCGATAA AGCGCTGAAC GGGGAGTTCC GTCCGCTACG CCGCCCCGCG
CTCGTATTCG GTTGCGTCCT CATCCTTTTG GGCTGCGCCG CCGTCTTGTA CCCTTTGGTG
GCGCACGGGC CACTCGTGAC ATTCGTCGGA GGAAGCGTCA TCGGTTCGAT ATTCCTCGCG
CAGGGGATCG TCGCCCTCGC GGCGGCCAGG CGCCGGGACC CGCGCCTGCT CTTAGGCGGC
CTCGTTCTTG GCTCGATCCT CCTCTTCCTG GCCGCGCCCC AATTCGTCTT CCCGATCTTC
GCGGAGCGCA AGTCGTACCG CGAGCCGGGC GAAATAGTCA AACGGCTTGC CAGCCCGGAC
GCTGTGCTGG TAAGCCAAGG GCTGCGTCAG GGGCTCTCCT TCTACGCGGG GCGGCGCGTC
GCCATCTTCG ACGGTGCCGG CGAGATCGAA TTCGGCAGCA AGATAGGCGA CCAGTCCGCC
TGGTTTTTGG AGCGCCCCGC ATTCCTCGCG CTCTGGAACG GGCCCAAGCC GGTGTACGCC
ATGGTTCAGC GGGAAACCCT GGGGGAACTT AAAGCCGGCT CCGTCATCCC GCCGCGCATC
CTGTGGCAGA GTTCGAAACA CTACCTCGTC ACCAACAGAT AA
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| Protein sequence | MQIPLYDRIR PDESRRRDLL ILTLVFGLLF LQFLGHSPLI DPDETRYAEI PREMLERGDL
ITPLLNYVKY FEKPVLLYWL NALSFSMFGI GEFSARLACA LSGLGTVLFS YHLGRELFGR
RVGLLSALVL GCCTGFLIQS RMNITDIPLT FTMTAALGSY ILAAREAERP KAGYYYLFYL
FAALAVLAKG LIGMVLPGAV IFWHIVLTRR WRILKEMRLF TGLILFFAVA APWFVLVCRD
NPEFFQFFFI HEHFERFLTT VHHRYQPFWY FIPILFGFMI PWSFFIPAAL RGFWRERTLP
GGEARLYLAL WAIIIFVFFS KSNSKLPAYI LPVYPALAIL IGALFDKALN GEFRPLRRPA
LVFGCVLILL GCAAVLYPLV AHGPLVTFVG GSVIGSIFLA QGIVALAAAR RRDPRLLLGG
LVLGSILLFL AAPQFVFPIF AERKSYREPG EIVKRLASPD AVLVSQGLRQ GLSFYAGRRV
AIFDGAGEIE FGSKIGDQSA WFLERPAFLA LWNGPKPVYA MVQRETLGEL KAGSVIPPRI
LWQSSKHYLV TNR
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