| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2982 |
|---|
| Symbol | |
|---|
| ID | 6779836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3449909 |
|---|
| End bp | 3451072 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642768977 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_002139781 |
|---|
| Protein GI | 197119354 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.221164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAGCG AATTTCTACC CTTTTCCACC CCGACCATCG AGGATGCCGA AATCAACGAG
GTGGTCGATT CACTCAAATC GGGCTGGATC ACCACCGGAC CGAAGGTAAA GCGCTTCGAG
GAGGAGTTCC GCGCCTATGT CGGCGCCCCG TTCGCGGTGT CCCTCTCCTC GGCCACCGCC
GGGCTGCACC TGACCCTTTT GGCCTTGAAA TTCCGGGAAG GGGACGAGGT GATCACCACC
CCGATGACCT TCGCCTCTAC GGTGAGCATC TGCGTTCTCT GTGGCCTTAA GCCGGTCCTC
GTCGATATCG AGCCGGGAAC CCTTAACATA GACGCCGGGA AGATACGAGA GAAGATCACC
CCGCGCACCA GGGCCATCAT CCCGGTGCAC TTCGCGGGGC AGTCCTGCGA CATGGACCCG
ATCTTCGATC TGGCCCGCGA GTTCAACCTT ACCGTCATCG AAGACGCGGC ACACGCCGCC
GGCACCGAGT ACAAGGGGCG CAAAATCGGC TCCCTGGACA GCATCTCCAT CTTCTCATTC
CACCCCAACA AGAACATCAC CACCGGCGAG GGGGGGATGG TCTGCACCGC GGATGAAGCG
ATTGCCGAAG AGGTGTCGCT TTTGAAGTTC CACGGCATGA GCCGCGAGGC GTGGAAGCGC
TTCGCGGTGA GCGGGACGCC GGGCTACGAC ATCGTGCTTC CCGGTTTCAA GTACAACATG
ATGGACATCC AGGCGGCCCT GGGGATCCAC CAGCTCCCCA AGCTGGACGG CTTCATCGAC
CGGCGCACCG AGATCGCCCA TTTCTACAAC CAAGAGCTTG CCGACGTGGC TGAACTAAGC
CTCCCCGCGT ACGCCCCCTA CAGCCAGCGC CACGCCTGGC ACCTCTATAC GCCGCTGGTT
AAAATCGAGC GGCTCTCCAT CGACCGGGAC GGCTTCATGG CGCAGTTGAA GGAACTCAAC
ATCGGCACCG GACTGCACTA CAAGGCGGTA CACCGACACG CCTGGTACCA GGCCAACCTG
CCGCAGCCGG AAAACTCGCT CCCAAACGCC GACTACGCCT CCGACCGCAT CCTGTCGCTG
CCGCTTTTCC CGAAAATGAC GCAAGAAGAC GCGCGCGACG TAGTTGAAGC TGTAAAGATC
GTGATCGCAA GGAACCGCAA ATGA
|
|---|
| Protein sequence | MRSEFLPFST PTIEDAEINE VVDSLKSGWI TTGPKVKRFE EEFRAYVGAP FAVSLSSATA
GLHLTLLALK FREGDEVITT PMTFASTVSI CVLCGLKPVL VDIEPGTLNI DAGKIREKIT
PRTRAIIPVH FAGQSCDMDP IFDLAREFNL TVIEDAAHAA GTEYKGRKIG SLDSISIFSF
HPNKNITTGE GGMVCTADEA IAEEVSLLKF HGMSREAWKR FAVSGTPGYD IVLPGFKYNM
MDIQAALGIH QLPKLDGFID RRTEIAHFYN QELADVAELS LPAYAPYSQR HAWHLYTPLV
KIERLSIDRD GFMAQLKELN IGTGLHYKAV HRHAWYQANL PQPENSLPNA DYASDRILSL
PLFPKMTQED ARDVVEAVKI VIARNRK
|
|---|
| |