| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2978 |
|---|
| Symbol | |
|---|
| ID | 6779832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3446040 |
|---|
| End bp | 3446693 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642768973 |
|---|
| Product | DNA polymerase beta domain protein region |
|---|
| Protein accession | YP_002139777 |
|---|
| Protein GI | 197119350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC AGATGATCAA ATCGGTTGCC GCCGAGGCGC CGTCGAGAGT GACCATAGTT
TGGCGCTCCG GCAAGCATAC TACGGTCGAA CTGGCGGAAT ATCTGGACTC TCCGGGGTAC
GAAAAACTTA GAGAGCCGGC ATTTTTTATC AGTGCCGCGG TGGAGGAATG GGGACACGGG
ATAGAGTGGG GCGACGGTGA ACTCGGTATT GACGCGGACA CCTTGTACCG GTTGGGGAAG
GAACAGGCGG GGCTCGCTTA TGTTGATGCC ATCCTTAAAC ACCATCCCAC CGTCCAGGCA
ATCTATCTCT TCGGTTCTTA TGCTACTGAA GACGAGCGAG ATGACAGCGA TGTCGATATC
GCTCTGCTGC TCAGGCCAGA GGAATCGAAG ATGGTGGGCT CGCTTTGCCA GAGCCCATTG
CACCTTGAGC TAGAGCGTCT ACTTAATCGC AACGTCGATC TTATCAACCT TCGCAATGTC
TCGACGGTGC TGCAGAAGGA AGTGATATTT GCCGAGCGCC GCATTTACGA TGGCGACATG
TATGCCGCTG ACGAGTTCGA GATGCTGACA ATGTCCCTGT ACCAGAAACT AAACGAAGAA
AGGGCGGGGA TACTCCAGGA TGCCATTCGC GGAGGGAGAT TGCATCAAGT ATGA
|
|---|
| Protein sequence | MTQQMIKSVA AEAPSRVTIV WRSGKHTTVE LAEYLDSPGY EKLREPAFFI SAAVEEWGHG
IEWGDGELGI DADTLYRLGK EQAGLAYVDA ILKHHPTVQA IYLFGSYATE DERDDSDVDI
ALLLRPEESK MVGSLCQSPL HLELERLLNR NVDLINLRNV STVLQKEVIF AERRIYDGDM
YAADEFEMLT MSLYQKLNEE RAGILQDAIR GGRLHQV
|
|---|
| |