Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2962 |
Symbol | |
ID | 6779816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3428824 |
End bp | 3431433 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642768957 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002139761 |
Protein GI | 197119334 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3614] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACCA CCCCGCCACC AGTCGACAAC CCACCCTCCA CAAGCCTTTG GGCAAAAACC ATACATGTTT TGCCATACCT GGTCATGGCC CTTTCTTTTC TTTTGACTTT CTTCTTCTGG CGCCAGTACG ACCACAGCCT GAACATCAGA TCCCAGGAAG TATTCAACGA TCGCGTCGAT GAGATAAAGA GTAAGTTCTT CACCAGAATG ACGGATGACG AACAGATCCT GAGGGGGGCG GCCGGACTTT TCAACGCCAG TGAGGATGTG ACGCGCGACG AGTGGCGGCG CTATGCCCTG TCGCTGTCGC TTGATAAGCA CTTTCCCGGT TTCCAGGGTT TGGGCTTCGC CGAGGTGGTC CGTCCCAAGG ACTTGGAGCG CCATATCCAG CGGATAAGGC GAGAAGGGTT CCCCGATTAC AGATTATGGC CGGAGGGGGA GCGGCAGGAA TATACCGCCA TCATCTACTT GGAACCCTTC GACTGGCGCA ACCAGCGTGC CTTCGGCTAC GACATGTTCT CCGCCCCCCA CCGACGCGAG GCGATGTCGA AAGCCCGCGA CCTGGGAGAA GCTGTGGTAA CCGGTCCGGT GACACTGGTG CAGGAAACAA AGAGGGATAA GCAGACCGGA GTGTTGATGT ACCTCCCCGT GTACAAGCGG GGTCTCCCCT TGGAAACCGT AGCGCAGCGG CGGATCGCGG TGCAGGGATA TACATTTAGC CCGATCAGGA TCAAGAATTT CCTTTCGGCA ACCTTCCCCA GAATGCCGGA AGACATAGGC TTCAGGATCT ACACGGACAA GGAGCCGAAC CCCGCGGGGC TCCTCTACGA CTCCGTCTCC GACTCCAACC TCAACCTTCC GGAAAACTAC CGGGGCGAAC TGCAGGCGAC CCGGTCCTTT CAAGGGTTCG GCCGGAACTG GTTGTTGACC TTCGAGTCGC TGCCGCACAC GGCCCAGGAG CAGAGGAAAA CCCAGTCCAG AAACTACCTG ATCGTCGGCA TTACCGTCAG CATCCTGCTG TCGGTCATCG CATTCATGCT CCGTTCCGCA CATGCCGGCG CCATCGCCGC AGCCCAGGCA CTTAAGGAAA GCCAGGAGCG TTATCGCAAG ATCTCGGAAG ACAGTCCCGC CTATATTGCC ACCTTCCTTC CCGATGGCAC GCTCACATAT GTAAACCCCG CCTTGGCCCA CGACCTGGGA AAGCGCCAGG AAGACCTTTT AGGAAAAAGC TTCTTCGAGT TTCTCCTGCC GGAGTACCGG GAGCCGGTCA GGCTGGGGTT GCACGCCCTT TCGCCTCAAA ACCCGACCCA AACACTGGAA CAAGCCATGG TTGGTCCCAA TGAAGCTGTA ATCTGGCACG AATGGACCAA TCGGGCGGTG TTCGACGACC ACGGAGGCAT AACCGAGTTT CAGGGCGTGG GGCAGAACAT TACTGAGAGG AAGAAAGCAG CTGAAGAACG CTCCCGACTG GAACAGCAGA TGCTGCACGC CCAGAAAATG GAAAGCCTGG GAGTGCTGGC CGGCGGCGTG GCACATGACT TCAACAACAT CCTGATGGCC ATCATAGGGA ACGTGGACTT GTCACTGATG AAGATCGAGG AGGCCTCCCC CATCACCGCA AATCTGCGCA ACATCGAGAA AGCTGCAATG AGGGCGGCCG ATCTTGCCAA GCAGATGCTT GCCTACTCCG GCAAAGGGAA ATTCGTCATA GAAAAGCTGG ACCTGAACCG GCTGATCGAA AAGCTGCACC CGATCCTGGA ACCGTCGCTA CCGACCAACG CCGTCCTGAC ACTGAAGCTG CACAAGCCGC TCCCGATGGT CGAAGGGGAT GCCAACCAGA TGCGGCAGAT AGTGATGAAC CTGTTTATGA ACGCCGTAGA GGCGCTTGGC GAAAACGGCG GCGAGATAAT CATCAGCACC GATGACGGCG TACAGGACGG GGAGAGCCTG CAGAACGTGC TGCTGGGCGA AACCCTGGCC GAAGGAAGCT ACGTGCTTTT GGAGGTCACA GACACCGGCT GCGGCATGGA GAAGGAAGTG CTCGACAAAG TCTTCGATCC CTTCTTTACC ACCAAGTTCA CCGGCCGGGG GCTGGGTCTA GCCGCAGTGC ACGGCATAGT AAGAGGTCAC AAGGGCGGGA TAAGGATATC CAGCGAGCCC GGCATGGGAA CCACTTTTCA AGTGCTGCTG CCGACCTCTG AGCCCACACC GGTGGAGGTC TCGGTCCCGG AGGAAATCGA GAATGGCTGG AGCGGCGTGG GAAGGATTCT GCTCGTGGAC GACGAGGAGG TAGTGAGAAC CGTCGCGGCC GAGCTGCTGA AAGAGCTGGG GTTCACGCCT GTTGTTGCCG GCAGTGGCGC CGAGGCCATA GAAACCTTCA AGAACAACCA GGACCTACAG GCCGTCATCC TGGACCTGAC CATGCCCGGA ATGGATGGCG AAGAGTGCTT CCGCGCACTG CGGGGGATCG ATCCGGAAGT AAAAGTGATC ATGTCCAGCG GGTTCAGCGA ACAAGACGTA GTCCAGAAAT TTCCCGGCAA AGAGCTGGCA GGATTCATCC AGAAGCCGTA CACCCTCAAA GCCCTCAAAG AAGTGATGCG GAAGGTGTAG
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Protein sequence | MPTTPPPVDN PPSTSLWAKT IHVLPYLVMA LSFLLTFFFW RQYDHSLNIR SQEVFNDRVD EIKSKFFTRM TDDEQILRGA AGLFNASEDV TRDEWRRYAL SLSLDKHFPG FQGLGFAEVV RPKDLERHIQ RIRREGFPDY RLWPEGERQE YTAIIYLEPF DWRNQRAFGY DMFSAPHRRE AMSKARDLGE AVVTGPVTLV QETKRDKQTG VLMYLPVYKR GLPLETVAQR RIAVQGYTFS PIRIKNFLSA TFPRMPEDIG FRIYTDKEPN PAGLLYDSVS DSNLNLPENY RGELQATRSF QGFGRNWLLT FESLPHTAQE QRKTQSRNYL IVGITVSILL SVIAFMLRSA HAGAIAAAQA LKESQERYRK ISEDSPAYIA TFLPDGTLTY VNPALAHDLG KRQEDLLGKS FFEFLLPEYR EPVRLGLHAL SPQNPTQTLE QAMVGPNEAV IWHEWTNRAV FDDHGGITEF QGVGQNITER KKAAEERSRL EQQMLHAQKM ESLGVLAGGV AHDFNNILMA IIGNVDLSLM KIEEASPITA NLRNIEKAAM RAADLAKQML AYSGKGKFVI EKLDLNRLIE KLHPILEPSL PTNAVLTLKL HKPLPMVEGD ANQMRQIVMN LFMNAVEALG ENGGEIIIST DDGVQDGESL QNVLLGETLA EGSYVLLEVT DTGCGMEKEV LDKVFDPFFT TKFTGRGLGL AAVHGIVRGH KGGIRISSEP GMGTTFQVLL PTSEPTPVEV SVPEEIENGW SGVGRILLVD DEEVVRTVAA ELLKELGFTP VVAGSGAEAI ETFKNNQDLQ AVILDLTMPG MDGEECFRAL RGIDPEVKVI MSSGFSEQDV VQKFPGKELA GFIQKPYTLK ALKEVMRKV
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