Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2958 |
Symbol | |
ID | 6779812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3425000 |
End bp | 3426424 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642768953 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002139757 |
Protein GI | 197119330 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCGA ACAGCACGCC CGATGCCGTC GTGGTGGGTT CCGGACCCAA CGGCCTCGCC GCCGCCATCA CCCTGGCGCG AGCGGGGCTT TCCGTGACCG TCTTCGAGGA ATACCGCACC ATCGGCGGCG GAACCAGGAC GGAGGAACTC ACCCTCCCCG GGTTCTGGCA TGACGTCTGC TCCGCCGTCC ATCCCCTGGG CGTAGCCTCG CCGTTCTTTC TTTCGCTCCC CCTTCATGAA CACGGGCTGG AATGGATCTA CCCTGAGATC CAGCTCGCAC ATCCCTTGCC CGACGGCACC TCCGCCCTTT TATACCGCTC CATAGACAAG ACCGCTGAAC TCCTGGGGAG CGACGGAAAA GCTTACCTGC GGCTCATGTC TCCTCTGGTG CGGCAGTGGG ACGATTTGGC CCCCGATCTG CTCGCGCCGC TGCATTACCC GCAGCACCCG CTGGCGATGC TGCTCTTCGG CCTGCGAGGG ATCACCTCCG CGCAGCGGAT GGGCAACTCC TGCTTCAAAG AGCCAGCCGC GCGCGCCCTT TTCGCCGGGC TGGCCGCGCA TTCCTTCCTG CCGCTCACCG AGCCTCTATC CTCTGCGTTC GGCCTCGTTC TCGGCGCCCT CGGACACGTG GCCGGTTGGC CGGTGGCAAA GGGAGGCTCC CGCATGATAG CCGCAGCACT TGCCTCCTAT CTCCGCTCCT TGGGAGGGGA GATCGTCACC GATACCGGAA TCAACTCGCT GACGGAACTC CCCAAAGCCC GCCTCACCAT GCTCGACCTG ACGCCGCGCC AGTTGTTGAA GATCGACGCC CCCCTGCCGG AACGGTACCG GCAGAAGATC GAGGCGTATC GCTACGGCCC CGGCGTCTTC AAGATCGACT GGGCGCTGGA CGCTCCGATA CCGTGGGCGT CGGAAGGGTG CCGCCGCGCG ACGACGGTGC ATCTCGCCGG GACCGCGGAC GAGCTTGCCC GCTCCGAGCG TGAGGTGTCG CAAGGAAAAC ATCCGCACCA CCCCTTCGTT TTGCTCGCGC AGCCGACGCT GGTGGACCAA AGCCGGGCGC CGCTCGGAAA GCATGTGGGA TGGGCGTACT GCCATGTCCC CCACGGCTCC ACCGTCGACA TGACAGAACG GATCGAGGCG CAGGTGGAGC GCTTCGCACC CGGTTTTCGC AGCCTGGTGC TGGCCCGCCA TACCCGCAAC TGCGCGGAGC TTGAGCGCTA CAACCGAAAC CTGATCGGTG GAGACATAAA CGGAGGGATA CAGGACCTGC GCCAGTTCAT GGCGCGGCCG ACGCTTTTTT CACCGTACCG GACGCCGCTA AAAGGACTCT ACCTCTGCTC TTCGGGCACC CCGCCGGGCG GAGGCGTCCA CGGCATGTGC GGCTACCACG CCGCGAGCCT GGCTCTGGAG GATATCAAGA GATGA
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Protein sequence | MPPNSTPDAV VVGSGPNGLA AAITLARAGL SVTVFEEYRT IGGGTRTEEL TLPGFWHDVC SAVHPLGVAS PFFLSLPLHE HGLEWIYPEI QLAHPLPDGT SALLYRSIDK TAELLGSDGK AYLRLMSPLV RQWDDLAPDL LAPLHYPQHP LAMLLFGLRG ITSAQRMGNS CFKEPAARAL FAGLAAHSFL PLTEPLSSAF GLVLGALGHV AGWPVAKGGS RMIAAALASY LRSLGGEIVT DTGINSLTEL PKARLTMLDL TPRQLLKIDA PLPERYRQKI EAYRYGPGVF KIDWALDAPI PWASEGCRRA TTVHLAGTAD ELARSEREVS QGKHPHHPFV LLAQPTLVDQ SRAPLGKHVG WAYCHVPHGS TVDMTERIEA QVERFAPGFR SLVLARHTRN CAELERYNRN LIGGDINGGI QDLRQFMARP TLFSPYRTPL KGLYLCSSGT PPGGGVHGMC GYHAASLALE DIKR
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