Gene Gbem_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2958 
Symbol 
ID6779812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3425000 
End bp3426424 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID642768953 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002139757 
Protein GI197119330 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCGA ACAGCACGCC CGATGCCGTC GTGGTGGGTT CCGGACCCAA CGGCCTCGCC 
GCCGCCATCA CCCTGGCGCG AGCGGGGCTT TCCGTGACCG TCTTCGAGGA ATACCGCACC
ATCGGCGGCG GAACCAGGAC GGAGGAACTC ACCCTCCCCG GGTTCTGGCA TGACGTCTGC
TCCGCCGTCC ATCCCCTGGG CGTAGCCTCG CCGTTCTTTC TTTCGCTCCC CCTTCATGAA
CACGGGCTGG AATGGATCTA CCCTGAGATC CAGCTCGCAC ATCCCTTGCC CGACGGCACC
TCCGCCCTTT TATACCGCTC CATAGACAAG ACCGCTGAAC TCCTGGGGAG CGACGGAAAA
GCTTACCTGC GGCTCATGTC TCCTCTGGTG CGGCAGTGGG ACGATTTGGC CCCCGATCTG
CTCGCGCCGC TGCATTACCC GCAGCACCCG CTGGCGATGC TGCTCTTCGG CCTGCGAGGG
ATCACCTCCG CGCAGCGGAT GGGCAACTCC TGCTTCAAAG AGCCAGCCGC GCGCGCCCTT
TTCGCCGGGC TGGCCGCGCA TTCCTTCCTG CCGCTCACCG AGCCTCTATC CTCTGCGTTC
GGCCTCGTTC TCGGCGCCCT CGGACACGTG GCCGGTTGGC CGGTGGCAAA GGGAGGCTCC
CGCATGATAG CCGCAGCACT TGCCTCCTAT CTCCGCTCCT TGGGAGGGGA GATCGTCACC
GATACCGGAA TCAACTCGCT GACGGAACTC CCCAAAGCCC GCCTCACCAT GCTCGACCTG
ACGCCGCGCC AGTTGTTGAA GATCGACGCC CCCCTGCCGG AACGGTACCG GCAGAAGATC
GAGGCGTATC GCTACGGCCC CGGCGTCTTC AAGATCGACT GGGCGCTGGA CGCTCCGATA
CCGTGGGCGT CGGAAGGGTG CCGCCGCGCG ACGACGGTGC ATCTCGCCGG GACCGCGGAC
GAGCTTGCCC GCTCCGAGCG TGAGGTGTCG CAAGGAAAAC ATCCGCACCA CCCCTTCGTT
TTGCTCGCGC AGCCGACGCT GGTGGACCAA AGCCGGGCGC CGCTCGGAAA GCATGTGGGA
TGGGCGTACT GCCATGTCCC CCACGGCTCC ACCGTCGACA TGACAGAACG GATCGAGGCG
CAGGTGGAGC GCTTCGCACC CGGTTTTCGC AGCCTGGTGC TGGCCCGCCA TACCCGCAAC
TGCGCGGAGC TTGAGCGCTA CAACCGAAAC CTGATCGGTG GAGACATAAA CGGAGGGATA
CAGGACCTGC GCCAGTTCAT GGCGCGGCCG ACGCTTTTTT CACCGTACCG GACGCCGCTA
AAAGGACTCT ACCTCTGCTC TTCGGGCACC CCGCCGGGCG GAGGCGTCCA CGGCATGTGC
GGCTACCACG CCGCGAGCCT GGCTCTGGAG GATATCAAGA GATGA
 
Protein sequence
MPPNSTPDAV VVGSGPNGLA AAITLARAGL SVTVFEEYRT IGGGTRTEEL TLPGFWHDVC 
SAVHPLGVAS PFFLSLPLHE HGLEWIYPEI QLAHPLPDGT SALLYRSIDK TAELLGSDGK
AYLRLMSPLV RQWDDLAPDL LAPLHYPQHP LAMLLFGLRG ITSAQRMGNS CFKEPAARAL
FAGLAAHSFL PLTEPLSSAF GLVLGALGHV AGWPVAKGGS RMIAAALASY LRSLGGEIVT
DTGINSLTEL PKARLTMLDL TPRQLLKIDA PLPERYRQKI EAYRYGPGVF KIDWALDAPI
PWASEGCRRA TTVHLAGTAD ELARSEREVS QGKHPHHPFV LLAQPTLVDQ SRAPLGKHVG
WAYCHVPHGS TVDMTERIEA QVERFAPGFR SLVLARHTRN CAELERYNRN LIGGDINGGI
QDLRQFMARP TLFSPYRTPL KGLYLCSSGT PPGGGVHGMC GYHAASLALE DIKR