| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2950 |
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| Symbol | |
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| ID | 6779804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3415390 |
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| End bp | 3418404 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768945 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002139749 |
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| Protein GI | 197119322 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACT ATCGCCGGGG GCGCCGCCTC CCGCTCATTG CAGTCTCCCT CGCCGTCATC
GCCCTCGTCC TTGTCCCGAA GGGGGCACTG GCGCTGGAAA AGGCGACCGT CCAGCTGAAA
TGGCTGCATC ATTTCCAGTT CGCGGGGTAC TACGCGGCGC TGGAGAAAGG GTTCTACCGC
CGGGCCGGCC TCGACGTGAC CATCAAGGAG GGTGGGCCGA GAACCGAGGT GGAGGACGAG
GTACTCTCCG GCAGGGCGGA GTTCGGCGTC GGGACCTCGG CAATCCTTTT GCGCCGCGCC
CGCGGCGAAG ACCTGGTGGT GCTGGGGCAG ATCTTCCAGC ATTCGGCCGC CGTCCTGATC
ACCCCCCGCA GCACCGGAAT CCGCTCCATC GCCGACATGG CGCGCCGCAG GTTCATGTAC
TCCAACCAGC ACGGCGACAT GCTGACCCTT TTGAGGCAAA ACGGCGTCAG CGAAAAAGAG
CTGGTGCAGG TCCCCCATAA CGGCGACCCC CGCGGCCTCA TCAGCGGCAA GGCGGACGTC
ATGATGGGGT ACAGCTTCAA CGAGCCCTTC ATACTGGAGC AGGAAGGGGT ACCCTACCTC
CTCTTCTCCC CGCTTACCTA CGGCATAGAT TTTTACGGCG ACAACTTCTT CACCACGCGG
GCCAACATCG AGAGTAGGCC GGAACTGGTC CGCGCCTTCC GCAAGGCGAC GCTGGAGGGG
TGGCGCTATG CCATGGCCAA CAAGTCCGAA ATAGTCGACC TGATCCTCGC CAAGTACTCC
CGGGAAAAAA GCCGCGACTG GCTCATCTTC GAGGCGAACC AGATGGAGGC CCTGATCCAG
CCCACCCTGG TTGAGTTGGG GTACCAGAAC CCTGAGCGCT GGCGCCAGAT CGGCGAGTCG
TTCGCGAAGC TCGGCATGGT CCCGGAAGGC TTCGACAGCA CCGGCGTGAG CTTCGACCCC
GCCCCCGGCA AGTACTATCG CGTGATACTC CAAATACTGC TGGTCTGCGG TTCCGTCATA
GCGGTCCTGG TCGTCATCGT GATGAAGTTC AGGCAGTTGA ATCGAACTCT CAAGGCACAG
GTGGCCGAAC GCAAGGCGGC GGAGGAGGCG CTCAGGGAAA GCGAGGAGCG GCTGCGCGTC
ATCTTCGAGA CCTCACAGGC CGGCATCATC ATGGTCGACC CCCAGGGGGT CATCCGCTTC
GCCAACAAGA GGATGGCCGA GATGTTCGGC TGCCCTCACG ACAAGCTGAT CGGCTCCGAC
TACAAAAGCC ATCTCCACCC GGAACAGTGC GAGGTGGGGA GCAAACTTAT GGAGAAACTG
ATCCGCGGAG AAATGGAGCA GGCCTGCACG GAACGCCGCT ACCTGTGCGG GGAGCACGGG
GATTTCTGGG GCTACCTCTC CGGCAGAAGA CTGGAGACTC CCGACGGCAA GCTGCAGGCG
CTGATAGGGA TCATCTCCGA CATAACGGAC CGCATCAAGG CGGAGGAGGC ACGCGGGAAG
GCGCTCATGC TGCTGGAGAC CCTGCTGGCC CACTCCCCCA TGGGGATCAT CGTCTTCGAC
GGGGAAACCG GCTCCTGCAT CCTTTTGAAC CAGGCGGCGG CCGATATCTC CTGCTGGGGG
AAGGAGTCCC TGCTCGGGCG CAACTTCAGA AACTCGGCCT CCTGGCGCGA CGGCGGATTG
ACCGCGATCG CGGAAGAGGT TCTCGCCGAC GGCGGCGCGC GCCCCTTAGA GGCTCAGCTG
CACACCGCCG GGGGGAACGA GGTCACCCTG CGCTGCCACC TCTCGCGCTT TGAGGTGGAG
GGGAAGCCCC ACCTTCTGGT CTTGGGGCAG GATATCACCC AGGAGATGCG GCTGGAGCGG
GAGAACAAGC GGATCGAGGC GCAGATGCTC AACATGCAGA AACTGGAAAG CCTCGGGGTG
CTGGCGGGGG GCATCGCCCA CGACTTCAAC AACATCCTCA CCGGGATAGT GGGTAACATC
AGCTTCGCCC AACTGGCGCT CCCCGCGGCA CACAAGGCGG GGGCACCGCT GTTGAAGGCC
GAGAAGGCCT GCCAGAGAGC GGCGGAACTA GCCTCCCAGC TTTTGACCTT CGCCCGGGGT
GGGCAGCCTA TCAAGAAGGC GTTCTCCGTC AAGCCGCTGG TCGGGGAATC GCTCTCGCTG
GTTCTGCGCG GCACCAACGT CAAGGGGGTC ATCGACATCG CCGACGACCT TTGCGTCATC
GAGGCGGACG AGGGACAAAT AAACCAGGCT TTCAACAACA TCATCATCAA TGCCGTGCAC
GCCATGCCGG GGGGGGGAAC CCTCACCGTA ACGGGCGAGG ATGCCGTGAT GGAAGCAGGA
AACCGCTTCG GCCTCACGCA GGGCCCCTAT GTACGGCTGA GTTTCAGCGA CCAGGGATGC
GGCATCCCCA AGGCCGACCT GGAAAAAATC TTCGATCCGT ACTTCACCAC CAAGACCAGC
GGCACCGGCC TTGGCCTTGC ATCGACCCAC TCCATCGTCA CCAGGCACGG CGGCATGATC
CTCGTGGACT CGGCTCCGGA AAAGGGAAGC ACCTTCACCA TCTACCTCCC CTCCACCGGG
CACTCGGTGG CGGAAGAGGC GGGGCAGGAC AAGGCCGAGC GTTTGCATGG GGGGGGACGG
ATGGTGGCGG TCATGGACGA CGAGGAGATG ATCAGAGACC TCACCCAGTC CATGCTGGTC
GAGCTCGGCT ACCGTGTGGA TGTATGTTCC GACGGCGCCG AGGTGGTCGA ACTCTATCGC
GCCGCCTGCG CCCGCGGGGA ACGCTACTCG GCCGTGATCA TGGACCTCAC CGTCCCCGGG
GGGATGGGCG GCAAAGATGC GGCGCGTCGG ATCCTGGAGC TCGACCCTGA GGCGCGGTTG
ATCGTTTCCA GCGGCTACTC CAACGACCCC GTCATGTCCG AGCACCGCAG CTTCGGCTTC
TGCGCCACAC TGGTCAAGCC TTACACCGCC GGCGACATCG GCAGGGTGCT TGGGGAAGCA
ATAAACAGCA ATTGA
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| Protein sequence | MNHYRRGRRL PLIAVSLAVI ALVLVPKGAL ALEKATVQLK WLHHFQFAGY YAALEKGFYR
RAGLDVTIKE GGPRTEVEDE VLSGRAEFGV GTSAILLRRA RGEDLVVLGQ IFQHSAAVLI
TPRSTGIRSI ADMARRRFMY SNQHGDMLTL LRQNGVSEKE LVQVPHNGDP RGLISGKADV
MMGYSFNEPF ILEQEGVPYL LFSPLTYGID FYGDNFFTTR ANIESRPELV RAFRKATLEG
WRYAMANKSE IVDLILAKYS REKSRDWLIF EANQMEALIQ PTLVELGYQN PERWRQIGES
FAKLGMVPEG FDSTGVSFDP APGKYYRVIL QILLVCGSVI AVLVVIVMKF RQLNRTLKAQ
VAERKAAEEA LRESEERLRV IFETSQAGII MVDPQGVIRF ANKRMAEMFG CPHDKLIGSD
YKSHLHPEQC EVGSKLMEKL IRGEMEQACT ERRYLCGEHG DFWGYLSGRR LETPDGKLQA
LIGIISDITD RIKAEEARGK ALMLLETLLA HSPMGIIVFD GETGSCILLN QAAADISCWG
KESLLGRNFR NSASWRDGGL TAIAEEVLAD GGARPLEAQL HTAGGNEVTL RCHLSRFEVE
GKPHLLVLGQ DITQEMRLER ENKRIEAQML NMQKLESLGV LAGGIAHDFN NILTGIVGNI
SFAQLALPAA HKAGAPLLKA EKACQRAAEL ASQLLTFARG GQPIKKAFSV KPLVGESLSL
VLRGTNVKGV IDIADDLCVI EADEGQINQA FNNIIINAVH AMPGGGTLTV TGEDAVMEAG
NRFGLTQGPY VRLSFSDQGC GIPKADLEKI FDPYFTTKTS GTGLGLASTH SIVTRHGGMI
LVDSAPEKGS TFTIYLPSTG HSVAEEAGQD KAERLHGGGR MVAVMDDEEM IRDLTQSMLV
ELGYRVDVCS DGAEVVELYR AACARGERYS AVIMDLTVPG GMGGKDAARR ILELDPEARL
IVSSGYSNDP VMSEHRSFGF CATLVKPYTA GDIGRVLGEA INSN
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