| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2947 |
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| Symbol | |
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| ID | 6779801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3412215 |
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| End bp | 3414143 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768942 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002139746 |
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| Protein GI | 197119319 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACTATT TTCAGCAGAC AGGTACGAAC GACTCTCTGG ACCACGCGCA GCAGGAACTG
AAGGCTGCCA GGCTTGAGCT GCAGGCGAAA AGCGCGGAGC TTGAACGCGC TCGAAACGAC
CTGGAGAATT TTCTGAGCTG CGCCTGGACC GCCACCGCCT TCTTCGACCG CGAACTCAGG
CCGACTAGAC TGACGCCGAC CCTGGCGCAG CTTTTGGATC TTTCCCCCGA CGACACCGGA
GAGCTTTTGC CGAAGCTTTG CCGCAGGCTC GACTGGCCCA ACGCGGATGC GGAACTCCGG
AGCGTGGTCG GCGGCGCCGT CGTCTCGGAG CGGGAGGTGT CGGACCTGCT GACGGGGCAC
CAGTTCCTGC TGAGGTTCTT CCCCTATCTG AACGCCGAGG GAGAGACCGA GGGGGCCGTG
CTGAAGCTGA TAGACATAAG CGATTACAAG CTTGCCGATC AGCGGCTCCT CGAATACCGC
GCGGTGTTCG AGTGCACCGG CGACATGATC TACGTGTTCG ACCGCAACTA TCTTTTCCTC
CTGGCGAACA AGGCGTACCT CGAGTGCCAC CGGGTGCGGC ACGAGGAGCT TGTCGGCCGC
ACGGTGCAGG ATCTTTTGGG ACCAATGATG TTCGCGGAGG TCAAGGGGCA CATCGATGCC
TGCTTCGCCG GCGAAGAGGT GATCTTCGAG AGCCGGTACG ACTACCCCGC CAAGGGGGTT
CGGGACATCC TGATCACCTA CACGCCGCTT AAAAAGGGGG ACCGGGTCGA CAGGGTCGCC
TGCCTGATCA AGGACATGAC GGAGCGGACC CAACTGGAGG AGCAGCTGCG GCATGCGCAA
AAGATGGAAG CGATCGGCAC CCTCGCCGGT GGGATAGCGC ACGACTTCAA CAACCTTTTG
ACCGTCATCG CCGGCTATGC ATCCCTGATC CAGTTCAATT CGCAGGGAAG CGAGGTCGCC
TCCATGGCCG CCGAAATCCA GGGGTCGGTG GAGCGGGCGG CGGAAATGAC CCGCGGTCTC
CTTGCTTTTT CCAGGAAGCA GGCGGTGAAC CTGATGCCTG TCGAACTGAA CCAGCTCGTC
GAGGGGCTGC ACAAGAGCCT GAGGCGGCTC ATCACGGAAG ATATCGAACT GGCGGTCGAG
GTCTCCAGCG TCCCGCTTAT CGTCTCCTCG GACAAGGGGC AGCTGGAGCA GGTGCTCTTT
AACCTGGTGG TGAACGCGCG CGACGCCATG CCGTCGGGGG GGAAGCTCTT GATCCGGACC
GAACGGCTGC AGCTAAACCA CGCCCTGATC ACGGTTGCCG ATACCGGGGT AGGGATGAGC
CGCGAGGTGC AGGACCGTGT CTTCGAGCCT TTTTTCACCA CCAAGGAACT GGGAGTCGGG
ACCGGGCTCG GGCTTTCCAC CTGCTACGGC ATCATCAAAA AGCACAACGG CATAATAGAG
CTGCAGAGCG AGCCGGGTGC CGGGACCGTT TTCAGCATCT ACCTGCCGCT CTCCGAAGAG
CTGCCGGAAG CCGATAGCGC CGGCGGCCGG GCTCAGTGGG CGACCGGCAA CGAGACGGTG
CTCTTGGTCG AGGACGACGA GACGGTGCGG ACGATGACTC GTCTTTTGTT GCAGCATAAC
GGCTATCGCG TGCTCTGCGC CAGGGAGGGG GAGGAGGCGC TGAATATCTT CGCCGAGCAA
GGCGACGGGG TGGACCTGCT GCTCACCGAC CTCGTCATGC CGCGCCTGAA CGGGACTGAG
CTCGGTCTGC GGATCCACGC CCAGAGGCCA GATTTTCCCA CCATCTTCAT GAGCGGGTAC
CCGGCGGACA TCGTGTCGCA GAAGGGGATC GCCGCAACCG TTGACTACCT CGCTAAGCCG
ATAAAGCCGG AGCTCTTGTT GCGCCGGATC CGCGAGGCGC TCGATGCGCC CGGTGTCGCG
TCTGGCTAG
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| Protein sequence | MHYFQQTGTN DSLDHAQQEL KAARLELQAK SAELERARND LENFLSCAWT ATAFFDRELR
PTRLTPTLAQ LLDLSPDDTG ELLPKLCRRL DWPNADAELR SVVGGAVVSE REVSDLLTGH
QFLLRFFPYL NAEGETEGAV LKLIDISDYK LADQRLLEYR AVFECTGDMI YVFDRNYLFL
LANKAYLECH RVRHEELVGR TVQDLLGPMM FAEVKGHIDA CFAGEEVIFE SRYDYPAKGV
RDILITYTPL KKGDRVDRVA CLIKDMTERT QLEEQLRHAQ KMEAIGTLAG GIAHDFNNLL
TVIAGYASLI QFNSQGSEVA SMAAEIQGSV ERAAEMTRGL LAFSRKQAVN LMPVELNQLV
EGLHKSLRRL ITEDIELAVE VSSVPLIVSS DKGQLEQVLF NLVVNARDAM PSGGKLLIRT
ERLQLNHALI TVADTGVGMS REVQDRVFEP FFTTKELGVG TGLGLSTCYG IIKKHNGIIE
LQSEPGAGTV FSIYLPLSEE LPEADSAGGR AQWATGNETV LLVEDDETVR TMTRLLLQHN
GYRVLCAREG EEALNIFAEQ GDGVDLLLTD LVMPRLNGTE LGLRIHAQRP DFPTIFMSGY
PADIVSQKGI AATVDYLAKP IKPELLLRRI REALDAPGVA SG
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