| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2933 |
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| Symbol | |
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| ID | 6779786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3386551 |
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| End bp | 3388281 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642768927 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002139732 |
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| Protein GI | 197119305 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCGAG TGATTTTACT CAGCCTCGCA CTCTTGTGCA TTACTATAGC AATATACTAC
CAAGCTACAG GATTTAACTT TATACTTTTA GACGATAATG ACTATGTAAC TAGCAATGCC
CATGTGATGG AGGGACTATC GTTTGAGTCC ATAAAATGGG CTTTCATGTC AAATGTTTCA
GGACATTGGC ACCCCCTTAC ATGGCTTTCG CTTATGATGG ATTATCAATT TTTCGGTTTA
GATCCGATGG GCTATCATCT AACTAATATA GTTATTCATG GATTTAACAC TGTCCTGTTG
TTTGTTACTC TTAACTACAT GACGAAAGCA TTATGGAGAA GTGCTTTTGT CGCTGTACTT
TTTGCTCTGC ACCCTCTTCA CGTAGAATCT GTTGCCTGGA TTTCAGAGCG CAAAGATGTC
TTGAGTGGTT TCTTTTGGAT GCTAACTGTT CTTTCATATA TTGCTTATGT AAAGAGTTCA
AAAACATACA CATATTTTCT CTCGCTTACA TTTTTTGTCT GTGGGTTAAT GTCTAAATCA
ATGCTTGTAA CACTTCCACT TACAATGATT TTATTGGATT TTTGGCCCCT CAACCGTTTC
TCTCCCAGAG AGAAGGCACT GGAAGAATAT AAATTGATGG GGAGAGTGTT TGCGTTATTT
TCATTTTTAA AAGAAAAAAT CCCATTTTTT GTCTGTGTGC TTATTTCTAT GACTGCAACA
ATATATGCCA TGGGTAAGGG CACTGGACAG TTGAAAACTT TTGGTGAGAT TCCATTTGGG
CTCCGTATTG AAAATGTCAT CACAGCATAC GTAAAATATG TCAAAAATAC TTTCTGGCCC
ACCGATCTCG CCTGCTTTTA TCCATTTCCT GATTCTTTCT CACTCTGGCA GGTCTTCGGC
TCGCTGTTCT TTATACTGCT TGTGTCTGCA TTAACTATTT GGGGCAGACG TCGCTACCCT
TATTTAGCGG TGGGTTGGTT CTGGTTCCTT ATCACTCTTT TGCCTGTAAT TGGTTTAATT
CAAGTTGGTG ATCAGTCGAT GGCTGACAGA TATACTTATA TCCCTCTGAT TGGCCTTTTC
ATCATGGTTA CCTGGGGGAT CACCGATTTA ACAAAGAATC TGCAACGCCA GCCAGTCATT
CTTGCACTTA CTGCTAGTCA GCTGATATTT GCATCAGCCA TATTGACCTC AAACCAACTT
TCTTTTTGGC GCGACGAACT TACTCTTTTC AGACATGCAC TTGAAGTTAC AAAGCGAAAT
TATTTTGCGC ATACTCATGT AGGAGTTGCT TTACTTAATC AGGGGAACAC AGATATTGCA
ATCCAAGAAT TTCAAAAAGC AATTTCCATC AAACCGAATT ACGTACTCGC TCATAACGAT
CTGGGAGCTG CTTACGCTAA ACAAAGTAAA TACGACCAGG CCATTACTGA ATTTCAAACG
GCTATTACGA TAAATCCGCG AGCTGTTGTA TTCCATAAAA ATTTGGGAGA TACTTTTGCA
CAACAAGGCA ATCTTTATGC TGCGATTCGA GAATATCAGA TTGCTCTTAC CTTAAATCCT
GGTTCAGCTG AAATACATTT CTATCTAGGC AATGCTTTTG CTCGACTAGG AAATATTGAT
GCAGCGGTTA AAGAATATCA AACAGCTCTT GCGATAAATG CAAATTTCTC TCAGGCGCAA
ACTAATCTGG AAACTGTTCT CAACAACAGA CTCGGTGTTT ACAGGCCCTG A
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| Protein sequence | MRRVILLSLA LLCITIAIYY QATGFNFILL DDNDYVTSNA HVMEGLSFES IKWAFMSNVS
GHWHPLTWLS LMMDYQFFGL DPMGYHLTNI VIHGFNTVLL FVTLNYMTKA LWRSAFVAVL
FALHPLHVES VAWISERKDV LSGFFWMLTV LSYIAYVKSS KTYTYFLSLT FFVCGLMSKS
MLVTLPLTMI LLDFWPLNRF SPREKALEEY KLMGRVFALF SFLKEKIPFF VCVLISMTAT
IYAMGKGTGQ LKTFGEIPFG LRIENVITAY VKYVKNTFWP TDLACFYPFP DSFSLWQVFG
SLFFILLVSA LTIWGRRRYP YLAVGWFWFL ITLLPVIGLI QVGDQSMADR YTYIPLIGLF
IMVTWGITDL TKNLQRQPVI LALTASQLIF ASAILTSNQL SFWRDELTLF RHALEVTKRN
YFAHTHVGVA LLNQGNTDIA IQEFQKAISI KPNYVLAHND LGAAYAKQSK YDQAITEFQT
AITINPRAVV FHKNLGDTFA QQGNLYAAIR EYQIALTLNP GSAEIHFYLG NAFARLGNID
AAVKEYQTAL AINANFSQAQ TNLETVLNNR LGVYRP
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