| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2930 |
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| Symbol | |
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| ID | 6779783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3382724 |
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| End bp | 3384097 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642768924 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002139729 |
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| Protein GI | 197119302 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG CGGAAAACGG GCCTGACGCG GCTGTCTACC AGGCGATACT GACCAGCATG
GGCGAAGGGA TCATCTTCGC GGACCACGAG AACAGGATCG TCTTCGTGAA TGCGGCGGCG
GAGCAGGTGC GCGGCATCAA GGCGGAGAAG TTTCTGGGGC GCGACCTGAT CTCCATCCAT
ACGCCGCCGG CCCGCGAGCG CATCGCCTCG ATACTTGCGA GGCTTCGCGA CGGAAGCGTC
GCCTCCCACA CGCGCCCCCT GGAGACCAAG GGGCGCAGCT TCGAAAACTG CTACTATCCC
ATCCGCGACC GGGGGGAGCG CTTTGTCGGC ACCCTGATGA TCAGCAGGGA CATTACGGAA
CGGGAGCGGC TGAAGGAGGA GAACTCGGTG CTTAGGGAGC AACTCCTTAC CGAGTACGCC
TGCGGCGGGA TGATCGGCCG CAGCCGGGCC ATGCAGCCGG TGTTCCAGGT GATCCGCTCC
ACCGCGCCGC TGGAGTCGAC CATTCTGGTC ACCGGCGAAA GCGGCACCGG AAAGGAGCTG
GTGGCGCGCG AACTGCACCA AAGGAGCCGG CGCAGCGCAG GCCCCTTGGT CAAGGTTAAC
TGCGCGGCGC TTCCGGAGAC CCTGCTGGAA TCGGAGCTTT TCGGTTTCGA GAAGGGGGCG
TTCACCGGTG CGCTGCGGGA GCGCAAAGGG AAGTTCGAGC AGGCGGTGCG CGGCACGCTC
TTTTTGGATG AGATCGGCGA GATGCCGCTT TCGGCCCAGG CCAAGCTTTT GCGCGTGCTC
CAGGAAAAGA CCGTGGAACG GATCGGCGGC AGCAGGGAGA TCGAGGTGGA CGTCCGCATC
ATCGCCGCCA CCAACCGCGA CCTGCGCCAG GACGTGGCGG CGGGGCTTTT CCGCGAAGAC
CTCTTCTACC GCCTCAACGT GATCCCGATC GACCTCCCCC CCTTGCGCGA GCGGCTTGAG
GACATCCTCC CGCTGGCTGC CGTATTTCTC TCCCGGTTCT CTGAGGAGAT GAGCCGCCCC
CAGCTAAAGC TCTCGCGGGA GGCGAAGCAG GCCCTCTTGA AGCACCCCTA TCCCGGAAAC
GTGAGGGAGC TTAAAAACGC CATGGAACGC GCCACCGCGC TCTGCACCGA AGACACGCTC
GGCGTCGACG ACCTCCCCGC CGAGTTCGCG CAGCACGCGG CACAACTCCG CCCATCGGCG
GCGCCCCTGC AGCCGGCGCC GGGGCCGATG CTGTTGGCGG GCCTGGGCAA CCGGGAGGCC
GAGCTGATCC AGGAGGCGCT GGCGCTTTGC GGCAACCAAC GCGGCGAGGC CGCGCGCCTG
CTCGGCATCT CCAGAAAGAC GCTCTGGAAG AAGATGAAGC GTCTGAGCGG CTAG
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| Protein sequence | MSEAENGPDA AVYQAILTSM GEGIIFADHE NRIVFVNAAA EQVRGIKAEK FLGRDLISIH
TPPARERIAS ILARLRDGSV ASHTRPLETK GRSFENCYYP IRDRGERFVG TLMISRDITE
RERLKEENSV LREQLLTEYA CGGMIGRSRA MQPVFQVIRS TAPLESTILV TGESGTGKEL
VARELHQRSR RSAGPLVKVN CAALPETLLE SELFGFEKGA FTGALRERKG KFEQAVRGTL
FLDEIGEMPL SAQAKLLRVL QEKTVERIGG SREIEVDVRI IAATNRDLRQ DVAAGLFRED
LFYRLNVIPI DLPPLRERLE DILPLAAVFL SRFSEEMSRP QLKLSREAKQ ALLKHPYPGN
VRELKNAMER ATALCTEDTL GVDDLPAEFA QHAAQLRPSA APLQPAPGPM LLAGLGNREA
ELIQEALALC GNQRGEAARL LGISRKTLWK KMKRLSG
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