| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2921 |
|---|
| Symbol | |
|---|
| ID | 6779774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3369691 |
|---|
| End bp | 3371022 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642768915 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_002139720 |
|---|
| Protein GI | 197119293 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGA TGTTTTGGAT CCAGTTCGTG CTAGTGCTGG GAGCGGTGTT GATAGGTATC
CGCAGAGGCG GAGTGGCCCT GGGGTTAATC GGCGGGCTAG GCGTCACGGT GCTGGTGCTC
GGGTTCCGCA GTGTCCCTTC CGAGCCCCCG ATAGCCGTGA TGCTTATCAT CCTCGCGGTG
GTGACGGCGT CGGCGACCCT GCAGGTGGCG GGGGGGCTGG ACTACCTCGT GCAACTGACT
GAGAAGCTTT TGCGCGCTCA TCCCAAGTAC GTCACCATCC TCGCGCCTTT GTCCACCTTC
TTCCTTACCG TATGTTGCGG CACCGGCCAT GCCGTGTACG CGCTGCTTCC GGTCATCTCT
GACGTGGCCC TGAAGACGAA GATCCGCCCC GAGCGCCCCA TGGCGATCTC GAGCGTCGCC
TCGCAGATGG GTATCACCGC CAGCCCGGTG GCTGCCGCCG TCACATTCTT CCTCGGCTTC
GCCGCCAAGG CGGGGCACCC CGTCACCCTC ATCGACATCA TCTCCGTCAC CATGCCTGCC
GGCATCATCG GCGTGCTGGC CGCCGCCGCG TGGAGCTTCA ACCGCGGCAA GGACCTCGAC
AAGGACCCTG AATTTCAGGC CCGTCTCGAG GATCCGGAGT TCCGCAAGGG GCTTGACGGT
GAGGTCACTA CTCTCGGCAT GAAGATCTCC ACCACCGCCA AGGTCTCCGT GGCCCTGTTC
TTTGCCGGCG TAGGCAGCAT CATCCTGATC GCCAGCTGTC CCTGGATTCT CCCTTTGACC
GCTGAAGGCA AACCGATCGC CATGACCACC GTGGTCCAGT TTGTCATGCT TGCCTTCGGC
GCCTTCATCA TGTTCAGCGG CAACGTCAAG GCCAAGGAAA TAGCCCACTC CAGCGTCTTC
ACCGCCGGTA TGATCGCGGT TGTCTCCATC TTCGGCATCG CCTGGATGAG CGATACCTTC
ATCACCGCCA ACAAGAAGTT CCTGGTAGAC AACATCGGCG TCATGGTGAA GATGGCTCCC
TGGACCTTCG CCATTGCCAC CTTCTGCATC TCCGCCTTCG TTAAAAGCCA GGCAGCGACC
TTGGCCATCA CCCTTCCCCT GGGGCTCGCC CTCGGGCTCC CGGTACCGCT GCTACTCGGC
CTGATGCCGG CAAGCTACGC CTACTTCTTC TTCGCCTTCT ACCCCAGCGA CCTGGCCGCC
ATCAACATGG ACCGCACCGG CACGACCAGG ATCGGGAAAT ACCTACTGAA TCACAGCTTC
ATGATTCCCG GGCTGATCGG AGTCAGCGTC TCAACCGTGG TCGCCTACGC CATCTCGCAG
ATCCTTCTCT AA
|
|---|
| Protein sequence | MAAMFWIQFV LVLGAVLIGI RRGGVALGLI GGLGVTVLVL GFRSVPSEPP IAVMLIILAV
VTASATLQVA GGLDYLVQLT EKLLRAHPKY VTILAPLSTF FLTVCCGTGH AVYALLPVIS
DVALKTKIRP ERPMAISSVA SQMGITASPV AAAVTFFLGF AAKAGHPVTL IDIISVTMPA
GIIGVLAAAA WSFNRGKDLD KDPEFQARLE DPEFRKGLDG EVTTLGMKIS TTAKVSVALF
FAGVGSIILI ASCPWILPLT AEGKPIAMTT VVQFVMLAFG AFIMFSGNVK AKEIAHSSVF
TAGMIAVVSI FGIAWMSDTF ITANKKFLVD NIGVMVKMAP WTFAIATFCI SAFVKSQAAT
LAITLPLGLA LGLPVPLLLG LMPASYAYFF FAFYPSDLAA INMDRTGTTR IGKYLLNHSF
MIPGLIGVSV STVVAYAISQ ILL
|
|---|
| |