Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2918 |
Symbol | |
ID | 6779771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3366393 |
End bp | 3367589 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768912 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_002139717 |
Protein GI | 197119290 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAAG TACTGATTAT CGGGGCAGGC GGTGTAGGCG GGGTTGTGGC GCACAAGTGC GCTCAGGCCA CTGCAATCAC GGCCATCACG CTGGCATCGC GCACGGAGTC GAAATGCCGC GCCATCGCGG AGCAGATCGA GTTCCCGGTC GCCACCGCGC AGGTTAACGC CGACAACGTC CCGGAATTAA TAGAGCTGAT CGAGCGCGAA AAGCCGACGC TGGTGATCAA CGTGGCGCTT CCCTACCAGG ATCTGACCAT CATGGACGCC TGCCTCGCGA CCGGCGTCGA TTATCTCGAC ACCGCCAACT ACGAGCCGCT GGATACCGCG AAGTTCGAGT ACAGCTGGCA GTGGGCCTAT CAGGAGCGCT TCAAGGAGAA GGGGCTTATG GCGCTTCTTG GCTCGGGCTT CGACCCGGGC GTCACCAACG TCTACACCGC CCTCGCCGCC AAGAACTACC TGGACGAGGT GCATGAGATC GACATCATCG ACGCGAACGC CGGCAACCAC GGCCAGCCCT TCGCCACCAA CTTCAACCCG GAGATCAACA TCCGCGAGGT CACCGCTCCC TGCCGCCACT GGGAAAACGG CCAGTGGGTG GAGACCGCGC CGCTTGCCAC CAAGCAGAGC TTCGATTTCC CGGACGGCAT CGGCCCGATG AACATCTACC GCATGTACCA CGAGGAGATG GAGTCGCTGG TCAAGCACAT CCCGACCATC AAGAAGGCGC AGTTCTGGAT GACCTTCTCG GACAACTACC TGAAGCACCT CGAGGTGCTG CAGAACGTCG GCATGACCCG CATCGACGAG GTCGAGTTCA ACGGCCAGAA GATCGTGCCG CTGCAGTTTT TGAAGGCGGT ACTTCCTGAT CCCGGCAGCC TGGGTCCGCT CACCAAAGGG CGCACCTGCA TCGGCGTCAT CGCACGCGGC ATCAAGGACG GCAAGAGGAA ACAGGTCTAC ATCTACAACA TCTGCGACCA CGAGGCGTGC TACCGCGAGG TTAAATCGCA GGCGATCAGC TACACCACCG GCGTTCCCGC CGTGGTCGGC GCCATCATGA TGCTGACCGA CAAGTGGCGC GGCGAAGGTG TCTTCAACAT GGAGCAATTC GATCCGGAAC CGTTCCTGGA AAAACTGGGC TCGATGGGGC TGCCGACCGT GGTAGTCGAC GGCGGCGAGT GGGCGGAACT TACGTGA
|
Protein sequence | MSKVLIIGAG GVGGVVAHKC AQATAITAIT LASRTESKCR AIAEQIEFPV ATAQVNADNV PELIELIERE KPTLVINVAL PYQDLTIMDA CLATGVDYLD TANYEPLDTA KFEYSWQWAY QERFKEKGLM ALLGSGFDPG VTNVYTALAA KNYLDEVHEI DIIDANAGNH GQPFATNFNP EINIREVTAP CRHWENGQWV ETAPLATKQS FDFPDGIGPM NIYRMYHEEM ESLVKHIPTI KKAQFWMTFS DNYLKHLEVL QNVGMTRIDE VEFNGQKIVP LQFLKAVLPD PGSLGPLTKG RTCIGVIARG IKDGKRKQVY IYNICDHEAC YREVKSQAIS YTTGVPAVVG AIMMLTDKWR GEGVFNMEQF DPEPFLEKLG SMGLPTVVVD GGEWAELT
|
| |