Gene Gbem_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2918 
Symbol 
ID6779771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3366393 
End bp3367589 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content61% 
IMG OID642768912 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002139717 
Protein GI197119290 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAG TACTGATTAT CGGGGCAGGC GGTGTAGGCG GGGTTGTGGC GCACAAGTGC 
GCTCAGGCCA CTGCAATCAC GGCCATCACG CTGGCATCGC GCACGGAGTC GAAATGCCGC
GCCATCGCGG AGCAGATCGA GTTCCCGGTC GCCACCGCGC AGGTTAACGC CGACAACGTC
CCGGAATTAA TAGAGCTGAT CGAGCGCGAA AAGCCGACGC TGGTGATCAA CGTGGCGCTT
CCCTACCAGG ATCTGACCAT CATGGACGCC TGCCTCGCGA CCGGCGTCGA TTATCTCGAC
ACCGCCAACT ACGAGCCGCT GGATACCGCG AAGTTCGAGT ACAGCTGGCA GTGGGCCTAT
CAGGAGCGCT TCAAGGAGAA GGGGCTTATG GCGCTTCTTG GCTCGGGCTT CGACCCGGGC
GTCACCAACG TCTACACCGC CCTCGCCGCC AAGAACTACC TGGACGAGGT GCATGAGATC
GACATCATCG ACGCGAACGC CGGCAACCAC GGCCAGCCCT TCGCCACCAA CTTCAACCCG
GAGATCAACA TCCGCGAGGT CACCGCTCCC TGCCGCCACT GGGAAAACGG CCAGTGGGTG
GAGACCGCGC CGCTTGCCAC CAAGCAGAGC TTCGATTTCC CGGACGGCAT CGGCCCGATG
AACATCTACC GCATGTACCA CGAGGAGATG GAGTCGCTGG TCAAGCACAT CCCGACCATC
AAGAAGGCGC AGTTCTGGAT GACCTTCTCG GACAACTACC TGAAGCACCT CGAGGTGCTG
CAGAACGTCG GCATGACCCG CATCGACGAG GTCGAGTTCA ACGGCCAGAA GATCGTGCCG
CTGCAGTTTT TGAAGGCGGT ACTTCCTGAT CCCGGCAGCC TGGGTCCGCT CACCAAAGGG
CGCACCTGCA TCGGCGTCAT CGCACGCGGC ATCAAGGACG GCAAGAGGAA ACAGGTCTAC
ATCTACAACA TCTGCGACCA CGAGGCGTGC TACCGCGAGG TTAAATCGCA GGCGATCAGC
TACACCACCG GCGTTCCCGC CGTGGTCGGC GCCATCATGA TGCTGACCGA CAAGTGGCGC
GGCGAAGGTG TCTTCAACAT GGAGCAATTC GATCCGGAAC CGTTCCTGGA AAAACTGGGC
TCGATGGGGC TGCCGACCGT GGTAGTCGAC GGCGGCGAGT GGGCGGAACT TACGTGA
 
Protein sequence
MSKVLIIGAG GVGGVVAHKC AQATAITAIT LASRTESKCR AIAEQIEFPV ATAQVNADNV 
PELIELIERE KPTLVINVAL PYQDLTIMDA CLATGVDYLD TANYEPLDTA KFEYSWQWAY
QERFKEKGLM ALLGSGFDPG VTNVYTALAA KNYLDEVHEI DIIDANAGNH GQPFATNFNP
EINIREVTAP CRHWENGQWV ETAPLATKQS FDFPDGIGPM NIYRMYHEEM ESLVKHIPTI
KKAQFWMTFS DNYLKHLEVL QNVGMTRIDE VEFNGQKIVP LQFLKAVLPD PGSLGPLTKG
RTCIGVIARG IKDGKRKQVY IYNICDHEAC YREVKSQAIS YTTGVPAVVG AIMMLTDKWR
GEGVFNMEQF DPEPFLEKLG SMGLPTVVVD GGEWAELT