| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2894 |
|---|
| Symbol | |
|---|
| ID | 6779747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3338579 |
|---|
| End bp | 3339778 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642768888 |
|---|
| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
|---|
| Protein accession | YP_002139693 |
|---|
| Protein GI | 197119266 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.892057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCTT TGATTCTACG ACTGAAGAAG TTCTTCCCTG CGTCCCTGCA CTCCCGTATC
TTCCTCACCG GCGGCATGGT GCGCGACTTC CTGCTGGGGG TCGCCTGCCA GGACGTCGAT
CTTGCCGCCG CGGTTACCGC GGCGGAACTC GCCTCTCTCG GTTTCCGCCT GGTCGAGTCC
AAGAGCACCC CCAACATCTA CTTCAGTTAT CGTCAGGAAT TCGGAAAGAT CGAGGTCACC
CGCCTGGAGT CGGTGGAGGA ACTGACCTCC GATCTTTTCC GCCGCGATTT TCGGGTGAAC
GCCATGGCGA TGAGCCTGGA CGGCGCGCTC ATCGACCCGC TTCACGGGAA GGCCGACCTG
GAACAGCGCA TCCTGAGCGC CTGCACCCAG ACCAGCATCA CCGACGACCC CTTGAGGATC
TTCCGCGCTT TGCGCTTCGA ATGCGAGGGG TGGCACCTGG ACCGCGAGGC GGAGGCGCTC
TTGGTATCGC TCGACTGGTC CGACGCGTTC GCAGCGATTC CCGTGGAGCG CTTCTCACAG
GAGATGCTCA AGGCTTTGGC GAAGCCCGAG CCCGCTCATT TCTTCAGGCG CATGGTGGAG
TTTGAGGCGG GGAGGAACTA TCTGCCGGAG ATCTTCGAAA TGCAGCAGGT CATTGCCGGG
CCGCCGCAGC ACCACCCCGA GGGGGATCTG TTCACCCACT CGATGCAGAC GCTGGAGCGG
ATGGCTGCCC TGACCGATGA CGTGACCGGC CGGTTCTGCG CGCTCTTCCA TGATCTGGGA
AAGCTTTATA CCCCCAAAGA CCAGCACCCG AAGCACCACG GCCACGATGC GCTCGGGGCC
TCAGCTGCCG ATGCTTTCTG CAAGAGGCTG CGCCTGCCGT CGGCGCTGCA GCGCGCGCTG
AAAGCGACCA GCAAGCTGCA TGACACTGCG AACAAGTGGG AAGAGTTGAG GGACTCGACC
AAGATCAGGC TGGCCGTCGA CGCCGTCAAG GGGGGGATAG CGGAATTTCT GCCGCTTCAG
GTTGCGGCGG ACTGCGGCGG AAAGATGCCG GGGTGGGATG AGGCGCTCAG GGTGGCGGCG
CTGAACGCCG CGCAGCTGGG GATCGGGCGG GAGATGCTGG ATAACAAAGA AGTCCCGCCG
GAGAAGCTGC AGCAGATAAT CATGCAGCTA CGGGTGGAGG AGTTGAGAAG AAGTAGATGA
|
|---|
| Protein sequence | MDALILRLKK FFPASLHSRI FLTGGMVRDF LLGVACQDVD LAAAVTAAEL ASLGFRLVES
KSTPNIYFSY RQEFGKIEVT RLESVEELTS DLFRRDFRVN AMAMSLDGAL IDPLHGKADL
EQRILSACTQ TSITDDPLRI FRALRFECEG WHLDREAEAL LVSLDWSDAF AAIPVERFSQ
EMLKALAKPE PAHFFRRMVE FEAGRNYLPE IFEMQQVIAG PPQHHPEGDL FTHSMQTLER
MAALTDDVTG RFCALFHDLG KLYTPKDQHP KHHGHDALGA SAADAFCKRL RLPSALQRAL
KATSKLHDTA NKWEELRDST KIRLAVDAVK GGIAEFLPLQ VAADCGGKMP GWDEALRVAA
LNAAQLGIGR EMLDNKEVPP EKLQQIIMQL RVEELRRSR
|
|---|
| |