| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2893 |
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| Symbol | |
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| ID | 6779746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3336826 |
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| End bp | 3338544 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768887 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_002139692 |
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| Protein GI | 197119265 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTG AGCACTCCCG TCCCCAGTCA CAAAAGCCAT ACAAGAAAGA CGACTCAGCC
AGAACCGAAG GCGCCGAGTC CAGCGCTACC CCCAAGTACT CCAAAAACAC CTCAACTACA
GCGCGCAAAC CCAAAGCCGC CCAGACTGAG CGCACCGAAA GCACCCGCAG CTCCAGGGGC
GAAACTCCCG CTGCAGCGTT TGGCTCACGT CCCGCCCGCC CGAAGGGAGA TCGTTCGGCG
GCGCCTCCCG CACCGGGCAA AGGCAGGGAC CGTAAACCGG CGGCAAAGAC AGCCGGGAAC
AGACCGGAGA GGACGCCTGC TGGAAAGGGA GGAGCATCTT CCCGCGACGA GCGCCAGCCT
ACGCTGCGCA GCGGACAGGT GCTGGAGCTG AACATTCTCG CTACCAACGA CGAGGGCTTC
GGCGTGGCCA ACCACGAGGG GACCCGCGTG CTGGTGGCAG GGGGACTTCC GGGCGAGGTG
CTGGTGGCGA AGATCACCTA CGTCGGCCGC AGGGAAGCCT TCGCCCATAC CATAAAGTGT
CTGAAGCGTT CTCCGGACCG CAACCCCTCT CCCGCCTGCA CCCTGGGACG GGTGTGCGAC
GGCTGCGGAC TGATGCAGAT GCGCTACCCG GCCCAGTTGG CATGGAAAAA GTCGCTGGTC
GCCCGCCACT TCCGGAAATA CCCCTCTCTT TTCGAGGTCG CCATCAGGGA AACCATCGGC
TCGCCCAAGG AGCTTGGATA TCGCAACACG GCAAAACTTG TCATTGCCGG GAAGAACAAC
GATCCCGTCA TCGGCATCTA CCGTCGCAAC ACCCATGACG TCTTGCAGAT CGAGGACTGC
GCGCTGCACC ACCCGCTGAT CAATAAGGTG GTGAAGGCTG CCAAGGCCGG GATCAAGAAA
GGAAAGGTGC AGATCTACAA CCCCAAGAGC GAGATGGGGC TTTTGCGCTA CCTGGTGGTT
CGCGTGGCCG AAAAGACCAA TCAGGTCATG GTGGTTCTGG TGACGACGGA CCAGGGTTAC
AACGAGATGC ACCACCTGGC GAAGTTCATT CAGCAGGCGG TCCCGGAGGT CTCGGTGGTG
GCGCAGAACA TCAACACCTC GACCGGCAAC GTGATCTTCG GCACCAAGGA CCGCTCCATT
ACCAAGGCCC AGACGCTGAA GGCGTTCGTG GGTGACAAGA TCTTCAACCT TTCGCCCCAC
TCCTTCTTCC AGGTCAACAG CGGTGCCGCG CGCATCATCT ATGAGAAGGT GCGGGAGCTG
GCGAACCTGA AGGGGACCGA GCGGGTCATC GACGTCTACT GCGGCATCGG CGGCATCTCG
CTCTATCTCG CCGACCAGGC TCGCGAAGTG GTCGGGATCG AATTCGTCGA GGCAGCGGTC
GCCGACGCCA CCATCAACGC GGCACTGAAC CACGTGGAGA ACTGTCACTT CGAGGCCGGC
GACGCCGTGC ATCTGATTGA CGAGATCGGG GAGGAAGGGG GCGCGGACCT GATCGTGCTC
AACCCGCCGC GGAAAGGGTG CGACGAGAAG GTGTTGAGGA GCGTGGCCGC CATCAATCCC
CCACGCATCA TCTACGTTTC CTGCTCGCCC GAAACGCTGG CGCGGGATCT GGACATCCTC
TCCGGGCTCG GCTACCGCAC CGTGGAGGTG CAGCCGGTGG ACATGTTCCC GCAGACGGTG
CATGTCGAGG ACGTGGCGCT TCTGGAAAAA AAGCAGTGA
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| Protein sequence | MKFEHSRPQS QKPYKKDDSA RTEGAESSAT PKYSKNTSTT ARKPKAAQTE RTESTRSSRG
ETPAAAFGSR PARPKGDRSA APPAPGKGRD RKPAAKTAGN RPERTPAGKG GASSRDERQP
TLRSGQVLEL NILATNDEGF GVANHEGTRV LVAGGLPGEV LVAKITYVGR REAFAHTIKC
LKRSPDRNPS PACTLGRVCD GCGLMQMRYP AQLAWKKSLV ARHFRKYPSL FEVAIRETIG
SPKELGYRNT AKLVIAGKNN DPVIGIYRRN THDVLQIEDC ALHHPLINKV VKAAKAGIKK
GKVQIYNPKS EMGLLRYLVV RVAEKTNQVM VVLVTTDQGY NEMHHLAKFI QQAVPEVSVV
AQNINTSTGN VIFGTKDRSI TKAQTLKAFV GDKIFNLSPH SFFQVNSGAA RIIYEKVREL
ANLKGTERVI DVYCGIGGIS LYLADQAREV VGIEFVEAAV ADATINAALN HVENCHFEAG
DAVHLIDEIG EEGGADLIVL NPPRKGCDEK VLRSVAAINP PRIIYVSCSP ETLARDLDIL
SGLGYRTVEV QPVDMFPQTV HVEDVALLEK KQ
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