Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2889 |
Symbol | |
ID | 6779742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3331714 |
End bp | 3332460 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768883 |
Product | RNA methyltransferase, TrmH family, group 3 |
Protein accession | YP_002139688 |
Protein GI | 197119261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG AAGAAATCAT CTACGGCCTG AATCCGGTAA TGGAAGCACT GCGCGGCTCG CGCGAGATCC ACGAGCTTTT CGTAGCCGGC ACCAGCGCAG ACAAGCGCCT GGAGAAGCTC CTCAAGCTCG CCGCCGAGCG TAAGATCCCT GTGCGTCAGC GTGAGAAGGG CGACCTCAAC CGTCTGTGCG GCACCGAGCA CCATCAAGGC GTGGCCCTCA AGGTGGAGCC CTTTCCCTAC GCCGATCTGG ACGACGTACT GGAGGGACTG CAGGGTACCC GCGACGGTCT CATTCTGGTT CTCGACAGCG TGCAGGACCC GCACAACCTC GGTGCCCTCA TCCGCAGCGC TGCCTGCGCG GGAGCAAACG CCGTCGTCAT CCCCAAAGAC CGTGCAGCAG GAGTAACGGC AGTAGCCGAG AAGTCTTCAG CCGGCGCCAC CGAGACCATC TCCGTCGCGC AGGTAACCAA CATCTCCCAG GCGCTGGAGA GTCTGAAGAA AGCAGGCTTC TGGATCTACG GAGCCGACGG CTCCGCGAGG CACACCCTCT ACCAGCAGGA CTTCACTGGA CCGGTAGCAC TCGTAATAGG TGGGGAAGGG GAGGGTATCC GTCCGCTGGT CCGAAAAGGA TGCGATGCGG TCGTGAGCAT TCCGCTGCAG GGAGGCGTGA ACTCGTTAAA TGCCTCCGTA GCCGGAGGAA TCTTCCTGTT CGAGGTCGTG CGGCAGAGGG TTTCTGTGAA GAAGTAA
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Protein sequence | MSKEEIIYGL NPVMEALRGS REIHELFVAG TSADKRLEKL LKLAAERKIP VRQREKGDLN RLCGTEHHQG VALKVEPFPY ADLDDVLEGL QGTRDGLILV LDSVQDPHNL GALIRSAACA GANAVVIPKD RAAGVTAVAE KSSAGATETI SVAQVTNISQ ALESLKKAGF WIYGADGSAR HTLYQQDFTG PVALVIGGEG EGIRPLVRKG CDAVVSIPLQ GGVNSLNASV AGGIFLFEVV RQRVSVKK
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