| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2865 |
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| Symbol | |
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| ID | 6779717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3295116 |
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| End bp | 3297677 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642768859 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002139665 |
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| Protein GI | 197119238 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA TGAATAGAGA TACGCTGACG GTGGAACTGG AAAGGCTGCG GCAGGAAAAC
GAGGTCCTCT CCGGGCAGGT CAAGCGCCTG GTCAAAGCGG AAAGCAGGCT CTACGACTAT
CAGGAGAAAC TGGATCTGCA GCTTAAGGAA TACAGCGGGC TCTACGATCT CAATTCAAGG
CTCTACACCT GCCGCGACCT CCCCGCGATC TTCGATCTCG CCACCGAGTA CGTGATCAAC
AGGCTCGACT ACGAGCGGGT GCTCTTCTTC CAGAAAACCG AAAACAGCGG CGCCTATGCG
GTCTGCGCCT GCGACGGCTA CCACTACCCT CAGGAAAAAG AGGGCGTTTC CTCCCTCACC
CTCTCCCGCC AGGCAGCCAT CCTGACCCCG CTTTTCGCCG GGGCCAACTA CAGCATCTGC
ACGACAGATT CGCAGTCGCC CGATCTTGTC GAACACCGGG ACCTGCTGCT GATGCACGAG
TATTTCATCT GCCCCTTGGG AAACCGAACC GACCCCGTAG CATTTCTTGC CGTGGGAAAC
TCCGCCGAAA ACGCGGAATT CTACCGCAGG ATCAGCGACA GCGAGGAGGC CCTTTTCGGC
CTCGGCAACC TGGTCGGGCT CCTCTCCTCC ACCATCGAAA ACCAGATCCT CTACACCGGG
ATGAAGAAAG CACTTGAGCA GGAGCGCCTT GCCGAGGCGA AGTACCGGGG CATCTTCGAA
AACGCGATGG AAGGGATCTT CCAAACCACC CCCGACGGGA AATTCCTTTC CTGCAACCCG
GCGACGGCCG CCATACTGGG CTACAGCACC CCCGAGGAAG TGCTGGAAGG GGTGGTCAAC
GTAGGGCTGC AACTCTACGT GGACCCGCAG CGGCGCGACG AACTCTACGC CATGATGTTC
CAGCGGCAAA ATGTGAAGAA TTTCGAGGTC GAATTCTGCC GCAAGGACGG AAGCCGGATC
TGGGTCGATC TCAGTACCCG TCCAGCCTTC AACGAAGAGG GAGAACTGAT CTATATCGAC
GGGGTGATAC AGGACATCAC CGAGCGAAAG CACAACGAAG AGGCTCTGCG CAAGCTGTCC
CAGGTGGTCG AGCAGAGTCC GGTTTCCATC GTCATCACCG ACACCCAGGG GCGCATCGAA
TTCGTCAATC CGAAGTTCGT CCAGTTGACC GGCTACTCCC CCGGGGAAGT GCTCGGCCAA
AACCCGAGCA TCCTCAACTC CGGAAAGGCG CCGATCGATA AATCGCGGAA ACTATGGGAG
ACGATTCGGG CCGGCAAGGT CTGGGAAGGG GAGTTCCTGA ACCGGAAGAA GGATGGCGAA
CTCTTCTCCG AGCACGCAAC CATCTCCCCC ATCCGGAACA AGGACGGCGT CATCACCCAT
TTCCTGGCCA TCAAGGAGGA CATCACCGAA AGGAAGCTTT TGCAAGCCCA GCTTTTCCAG
TCACAGAAGA TGGAGTCGAT CGGAAGGCTC GCCGGCGGAG TGGCGCACGA CTTCAACAAC
ATGCTGAGCG TCATCCTGGG GAGCGCGCAG TTGGCGATGC GCTGCGTTAC CGAGGGGACC
CCGGTCTGGC AGGACCTGGA ACAGATAGTA CAGGCCGGGA AGCGCTCCAG CCAGATCACC
CGCCAGCTTC TCGCCTTCTC CCGAAAGGAG ATCATCGCGC CGCGCGAGGT GAACCTGAAC
GAGCACTTCA CGGAGATGCA GAAGACGCTG GGGCGCCTGA TCGGCGAGGA CATCCGCATG
AATTTCAATC CGGAGCCCGG CCTTTGGACC ATCGATGCGG ATACGACGCA ACTGGACCAG
ATCCTGGTCA ACCTGGCGGT GAACGCACGC GACGCAATGG GCAACGGGGG GGTACTCACC
ATAGAAACGG CAAACGTCCG GGTGGATGGC AGCTACAGCC AATTTCACCT GGATGCCTCC
CTTGGGGAAT ACGTGCAACT TGCGGTCAGC GACAACGGCT GCGGCATGGA CCGCGAGACC
CTGGCGCAGA TTTTCGAGCC CTTTTTCACC ACGAAAGAGG TGGGCAAGGG GACCGGGCTC
GGGCTCGCCA CCGTCTACGG CATCGTAAGG CAGCACAACG GCTTCATTAA CGTCTACAGC
GAACCGGGTG AGGGAACCAC CTTCCAGATA AACTTCCCCA GGTGTTCCGG AGCCGCGGTC
GATGCGGCAA AAGACGAAGA GGTTTCGCTC AGCGGTTCGG GAACGGTGCT ATTGGTCGAG
GACGACCCGC TGGTGCGCAG AACAACACTC AACACACTCA AGGAGATCGG CTACCACGTC
ATCGAGGCGG CCGGCGCCGA TGAGGCTATC GCCCTTTGCC GCAAGGAAGA TGCCGAGCTC
GACGTCATTC TCACCGACGT GGTGATGCCT GGCATGAACG GCAAGGAGAT GGTCGATGCC
ATCGAGTCGT TTCGCCCGGG GCTCAAGGTG CTATTCATGT CCGGCTACAC AAAAGACCTG
GTGGCGCAAC GTGGCGTGGT GGAAGGGGGG AGACACTTCA TCCAGAAGCC TTTCGATATC
CAATCCCTGG CCAGAAAGCT GCGTGAAACG ATGCAGCGCT GA
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| Protein sequence | MDKMNRDTLT VELERLRQEN EVLSGQVKRL VKAESRLYDY QEKLDLQLKE YSGLYDLNSR
LYTCRDLPAI FDLATEYVIN RLDYERVLFF QKTENSGAYA VCACDGYHYP QEKEGVSSLT
LSRQAAILTP LFAGANYSIC TTDSQSPDLV EHRDLLLMHE YFICPLGNRT DPVAFLAVGN
SAENAEFYRR ISDSEEALFG LGNLVGLLSS TIENQILYTG MKKALEQERL AEAKYRGIFE
NAMEGIFQTT PDGKFLSCNP ATAAILGYST PEEVLEGVVN VGLQLYVDPQ RRDELYAMMF
QRQNVKNFEV EFCRKDGSRI WVDLSTRPAF NEEGELIYID GVIQDITERK HNEEALRKLS
QVVEQSPVSI VITDTQGRIE FVNPKFVQLT GYSPGEVLGQ NPSILNSGKA PIDKSRKLWE
TIRAGKVWEG EFLNRKKDGE LFSEHATISP IRNKDGVITH FLAIKEDITE RKLLQAQLFQ
SQKMESIGRL AGGVAHDFNN MLSVILGSAQ LAMRCVTEGT PVWQDLEQIV QAGKRSSQIT
RQLLAFSRKE IIAPREVNLN EHFTEMQKTL GRLIGEDIRM NFNPEPGLWT IDADTTQLDQ
ILVNLAVNAR DAMGNGGVLT IETANVRVDG SYSQFHLDAS LGEYVQLAVS DNGCGMDRET
LAQIFEPFFT TKEVGKGTGL GLATVYGIVR QHNGFINVYS EPGEGTTFQI NFPRCSGAAV
DAAKDEEVSL SGSGTVLLVE DDPLVRRTTL NTLKEIGYHV IEAAGADEAI ALCRKEDAEL
DVILTDVVMP GMNGKEMVDA IESFRPGLKV LFMSGYTKDL VAQRGVVEGG RHFIQKPFDI
QSLARKLRET MQR
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