Gene Gbem_2840 details

Gene Information

• Locus tag: Gbem_2840
• ID: 6779692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 3268932
• End bp: 3270917
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642768834
• Product: SSS sodium solute transporter superfamily
• Protein accession: YP_002139640
• Protein GI: 197119213
• COG category: [R] General function prediction only
• COG ID: [COG4147] Predicted symporter
• TIGRFAM ID: [TIGR00813] transporter, SSS family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GAATCGCCGC CATAACGCTC GCTCTTACGT TCTCCGTTTG CGCCGCCGCT 
CCCCTCGCAG TCGCAGCCTC GGTCGGCACC GCCGCACCGC AGTCACCGGC AATAGCAGCG 
CCTGCGGCAA CAGTTGCACC TGCAGCCGCC ACCGCGGCAG CGCCCACCGC AGCCAAGGCC 
GCTCCGGCCA AGGGCGCGGA CACCCAGCCC GCCAAGGTGA CCCCCAACCG CGGCATCACC 
ATCGGCATGT TCGCGCTCAT CATCGCCATC ACCATGGGGG TGGTGGTCTG GGCCGCGAAG 
AAGACGCAGA CCGCCGCCGA CTTCTACACC GCAGGCGGAG GGATCACCGG CCTCCAAAAC 
GGCTGGGCCA TAGCCGGCGA CTACATGTCG GCCGCCTCTT TCCTCGGCAT GTCGGGGCTC 
ATCTCGCTCT ACGGCATCGA CGGCTTCATG TACGCGGTGG GGCCGATGTT CTCGTTCATC 
GCCATCCTGC TGGTCATCGC CGAGCCCTGC CGCAACGCCG GCAAGTACAC GCTGGGCGAC 
ATCCTCTCCT TCAGGTCGTC GCCCAAGGTG GTGCGCGGCG TAGCGGCGCT CTCCACCGTC 
ACCGTCTCGA TCTTCTACCT GATCGCGCAG ATGGTCGGCG CGGGGAAGCT GATGCAGATG 
CTGATCGGGA TCCCTTACCG CGTCTCGGTC ATCGGGGTCG GGGCCCTCAT GGTCGCCTAC 
GTCGTCTTCG GCGGCATGAA AGCCACTACC TGGGTCCAGA TCATCAAGGC CTCGCTCTTG 
ATGGGCGCCA CCACGCTTTT GTGCATCCTG GTCGCGGCGA AGGCGGGCTT CAACCCGGTC 
TCCTTCTTCA CCGACATCGT GAACAACCCG GCCATCCAGG ATCACGTCAG GCTGAACGTA 
CTGAAGGACG CCATTCCCAA GGCGGGGGTG GATTACGGCC AGCGCTTCCT GGAGCCCGGG 
CTCTTCCTGA AAAGCCCGCT GGATCAGATC TCGCTCGGTA TCGCCTGGGC GCTTGGCGCA 
GCCGGCCTGC CGCACATCCT GATGCGCTTT TTCACGGTTC CCAGCGCCAA GGAAGCGCGC 
AAGTCGATCA TCATCGCCCT TTTCCTTAAC TCCACCTTCT TCTTCATGAT CAGCATCATC 
GGCTTCGGCG CAGCGCTCTA CCTGACCCCC CAGGGCATCC TGGCGGTGGA CAAAGGTGGG 
AACATGGCGA CGCTCTTATT GGCACAGCAC ATGGGTGGGG GCGCCGGGAG CCTCGGCGGA 
GACGTCTTCC TGGCCTTCAT CTGCGCCGTA GCCTTCGCCA CTATCCTCGC CGTCGTCTCC 
GGTCTCGTGC TCGCAGCCTC CGCGGCCATC GCCCACGACG TCTATGTCAA CATCATCAAG 
GACGGCAAGG CCGACCAGCA CCTGCAGGTG AAGGTGGCGC GCATCACCTC CCTTTTCGTC 
GGCACCTCCG CCATCCTGAT GGGGCTTGCC GCCGAGAAGG AGAACGTGGT CGCCCTGGTG 
GCGCTCGCCT TCGCGGTCGC CGCCTCGGGG AACTTCCCGG TGGTCATGCT CTCGCTCTTC 
TGGAAGAAGT TCAACACCGC GGGGATCGTT TCCGGCCTCG TGGTCGGGAC CGTCACCGCC 
CTCGCGCTGG TGATGGTGTC GCCGGTGATG ACCTATCCCA AGAAGGTCGC GGCCGACGCG 
AAGAAGATCG TCGAGACCCT GGAAAAGAAG CAGGCAACGG GCGTGGCGCT GGCGGACAAG 
GAGCTGAAGA CCCTGGAGAA GTCCCGGGTG GAATATGAGA AGAACAAGGA TGGCAGCTCC 
ATGGTCGGGC TCGATAAGCC GATATTCCCG CTGAAGAACC CGGGTATCGT CTCGGTGCCC 
CTCGGGTTCC TGGCCGCCGT ATTTGGTTGC CTCTTGTTCC GCGACCGCCG CGCCGAAGAC 
ATGTTCGCCG AGATCGACGT GCGGCAGAAC ACCGGCCTCG GGATAGCCAA GGCGACAGAT 
CACTAG 

 

Protein sequence

MKKRIAAITL ALTFSVCAAA PLAVAASVGT AAPQSPAIAA PAATVAPAAA TAAAPTAAKA 
APAKGADTQP AKVTPNRGIT IGMFALIIAI TMGVVVWAAK KTQTAADFYT AGGGITGLQN 
GWAIAGDYMS AASFLGMSGL ISLYGIDGFM YAVGPMFSFI AILLVIAEPC RNAGKYTLGD 
ILSFRSSPKV VRGVAALSTV TVSIFYLIAQ MVGAGKLMQM LIGIPYRVSV IGVGALMVAY 
VVFGGMKATT WVQIIKASLL MGATTLLCIL VAAKAGFNPV SFFTDIVNNP AIQDHVRLNV 
LKDAIPKAGV DYGQRFLEPG LFLKSPLDQI SLGIAWALGA AGLPHILMRF FTVPSAKEAR 
KSIIIALFLN STFFFMISII GFGAALYLTP QGILAVDKGG NMATLLLAQH MGGGAGSLGG 
DVFLAFICAV AFATILAVVS GLVLAASAAI AHDVYVNIIK DGKADQHLQV KVARITSLFV 
GTSAILMGLA AEKENVVALV ALAFAVAASG NFPVVMLSLF WKKFNTAGIV SGLVVGTVTA 
LALVMVSPVM TYPKKVAADA KKIVETLEKK QATGVALADK ELKTLEKSRV EYEKNKDGSS 
MVGLDKPIFP LKNPGIVSVP LGFLAAVFGC LLFRDRRAED MFAEIDVRQN TGLGIAKATD 
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