Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2834 |
Symbol | |
ID | 6779686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3260602 |
End bp | 3261447 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768828 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_002139634 |
Protein GI | 197119207 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0280401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGA CAGTCGGTGT TTTAGGGGCG GGGCAGATGG GAAGCGGGAT CGCCCACGTT TTCGCGCAGC ACGCTTACCA GGTCCTGGTC TTCGATATCT CCGAGGCACA GCTTTCGAAA GCGCTCAAAT CGATCGAGCA GAACCTGGAG CGGCAGGCTA AGAAGGGGGT CATCTTCGAC ACCAGCATCC AGGGGATCAT GGCCCGCATC ACGGCCACCA AGGAGCTCAA GGACTTCGCC GGCTGCGACC TCGTCATCGA GGCCGCCACC GAAAACGAGG CGCTCAAGTT CGATCTCTTC AGAAAGCTTG ACGAGGTGGT GAAAAAGGAA GCGATCCTCG CCTCCAATAC CTCCTCCATC TCCATTACCC GCATCGCGGC AGTGACCAAA AGGCCGGATC AGGTGATCGG GATGCACTTC ATGAACCCGG TGCCGGTGAT GCAGCTGGTC GAGGTAATCC GCGGCATCGC CACCAGCGAC GAAACCTTCG AGGCCATAGG GCACCTGGTA GGCCTCCTGA ACAAGCAGAT GGCCGTCTCC CAGGACTACC CCGGCTTCAT CGTGAACCGG GTGCTGATCC CGATGATCAA CGAGGCGGTC TTCGCCCTCT ACGAAGGGAT AGCTACCGCC GAGGACATCG ACAAGGGGAT GAAGCTCGGC ACCAACCAGC CGATGGGCCC CCTGCAGTTG GCCGATTTCA TCGGGCTCGA CACGGTGCTC GCCATCTGCA ACGTGCTGCA CGACGGCTTC AAGGACCCGA AGTACCGCCC CTGCCCGCTC CTGGTGAAGA TGGTGGACGC AGGCTACCTC GGCAAGAAAT CCGGGAAGGG CTTTTACAAC TACTAG
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Protein sequence | MFKTVGVLGA GQMGSGIAHV FAQHAYQVLV FDISEAQLSK ALKSIEQNLE RQAKKGVIFD TSIQGIMARI TATKELKDFA GCDLVIEAAT ENEALKFDLF RKLDEVVKKE AILASNTSSI SITRIAAVTK RPDQVIGMHF MNPVPVMQLV EVIRGIATSD ETFEAIGHLV GLLNKQMAVS QDYPGFIVNR VLIPMINEAV FALYEGIATA EDIDKGMKLG TNQPMGPLQL ADFIGLDTVL AICNVLHDGF KDPKYRPCPL LVKMVDAGYL GKKSGKGFYN Y
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