Gene Gbem_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2834 
Symbol 
ID6779686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3260602 
End bp3261447 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID642768828 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_002139634 
Protein GI197119207 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0280401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGA CAGTCGGTGT TTTAGGGGCG GGGCAGATGG GAAGCGGGAT CGCCCACGTT 
TTCGCGCAGC ACGCTTACCA GGTCCTGGTC TTCGATATCT CCGAGGCACA GCTTTCGAAA
GCGCTCAAAT CGATCGAGCA GAACCTGGAG CGGCAGGCTA AGAAGGGGGT CATCTTCGAC
ACCAGCATCC AGGGGATCAT GGCCCGCATC ACGGCCACCA AGGAGCTCAA GGACTTCGCC
GGCTGCGACC TCGTCATCGA GGCCGCCACC GAAAACGAGG CGCTCAAGTT CGATCTCTTC
AGAAAGCTTG ACGAGGTGGT GAAAAAGGAA GCGATCCTCG CCTCCAATAC CTCCTCCATC
TCCATTACCC GCATCGCGGC AGTGACCAAA AGGCCGGATC AGGTGATCGG GATGCACTTC
ATGAACCCGG TGCCGGTGAT GCAGCTGGTC GAGGTAATCC GCGGCATCGC CACCAGCGAC
GAAACCTTCG AGGCCATAGG GCACCTGGTA GGCCTCCTGA ACAAGCAGAT GGCCGTCTCC
CAGGACTACC CCGGCTTCAT CGTGAACCGG GTGCTGATCC CGATGATCAA CGAGGCGGTC
TTCGCCCTCT ACGAAGGGAT AGCTACCGCC GAGGACATCG ACAAGGGGAT GAAGCTCGGC
ACCAACCAGC CGATGGGCCC CCTGCAGTTG GCCGATTTCA TCGGGCTCGA CACGGTGCTC
GCCATCTGCA ACGTGCTGCA CGACGGCTTC AAGGACCCGA AGTACCGCCC CTGCCCGCTC
CTGGTGAAGA TGGTGGACGC AGGCTACCTC GGCAAGAAAT CCGGGAAGGG CTTTTACAAC
TACTAG
 
Protein sequence
MFKTVGVLGA GQMGSGIAHV FAQHAYQVLV FDISEAQLSK ALKSIEQNLE RQAKKGVIFD 
TSIQGIMARI TATKELKDFA GCDLVIEAAT ENEALKFDLF RKLDEVVKKE AILASNTSSI
SITRIAAVTK RPDQVIGMHF MNPVPVMQLV EVIRGIATSD ETFEAIGHLV GLLNKQMAVS
QDYPGFIVNR VLIPMINEAV FALYEGIATA EDIDKGMKLG TNQPMGPLQL ADFIGLDTVL
AICNVLHDGF KDPKYRPCPL LVKMVDAGYL GKKSGKGFYN Y