Gene Gbem_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2798 
Symbol 
ID6782797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3225722 
End bp3228073 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content64% 
IMG OID642768792 
ProductMutS2 family protein 
Protein accessionYP_002139598 
Protein GI197119171 
COG category[L] Replication, recombination and repair 
COG ID[COG1193] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01069] MutS2 family protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCA CCGATACACT CAAGCGGCTG GAGTTCGACA AGATCCTCGA CACGGTCGCT 
TCTTATGCAC ACTGCGACGC CTCTCACTTT GGGGCGCTGT CCATAACACC CCTTTCGGCA
CGTGACGAGA TCGAACTCCG CCTGGGGCTC GTCGATGAGG TGCGCAAGCT CACCCGGTTC
GGCATCAGCC TCAAGCTCTC GGAGTTCGAG GACATCACCC CCCAGGTCAG AGCGGTCCGC
CCGACCGGCG CGGTGATCTC GCCGCTTGAG TTGCAGCGCT TCATCCCGAC GCTGCGCGTA
ATGAGCGCCA TCTCCGCACA GCTCGGTTTC CGCACCGACG TGCCGCTCCT CACCTCGCAA
GCGGGCTCCA TCACCGGATT CCCGGACCTC TTGAATCCAC TGGAACACAC GGTGAACGAG
GAAGGTGAGA TCCTCGACAC CGCTTCCAGG CTCCTGGCCG ACATCCGCGG CCGCAAGAAG
GGGTTCACCG CCCGCATCAA GAAAAGGCTG GAGGAGATCG TCCGGGAGCG GCATACCGCC
ATCTTCCTGC AGGACGACTT CATCACCCAG AGGTCCGGGC GCTGGGTCAT CCCGGTGCGC
ATGGACTCGA AGGGGATGGT CCCGGGCGTC GTGCACGACG TCTCCAACTC GGGCGAGACA
GCCTTCATGG AGCCCTTGGA GATCATCGGG CTCGCCAACG AGCTGGAGAA CCTGGTCGCC
GACGAGAGGG CCGAGGAGAT CAGGATCGTC AGGCAGATCT GCAACTGGAT CAGGGAGGAC
GCGGAACAGA TCCTGGAGCA GTTCGAGGCT CTGGTGCGCC TGGACATCCT CAACTGCATC
GCCACCCTGA GCGACAAGCT CAGGAGCGAG ACGCCGGTCA TCTCGCCTAC CCCCGCCATA
CTGCTCAAGT CGGCACGCCA CCCTATCCTC ACCCTGATGG GTAAGGAGGT GGTCCCCCTC
GACCTGGAGC TCGCCGCCGA CAACCGGGTC ATGGTGGTCA CCGGCCCCAA CACCGGCGGC
AAGACCATCG CCATCAAGAG CGCGGGTCTC CTCTGCGTCA TGGCCCTTTG CGGCATGCCG
GTCCCGGCGC TTCCCGGCAC TGTGCTCCCC TTGGTGGAAA GCATCCTGGT CGACATCGGG
GACGAACAGT CCATAGAGGA AAGCCTCTCC ACCTTCTCCG CCCACATCTT CAAGATCTCC
AGCATCATCG AGGAGGCAGG ACAAGGCGCG CTGGTGCTTC TGGACGAACT GGGGACCGGC
ACCGAGCCGG GCCAGGGCGC GGCCATCGCC TGCGCGGTCC TCAAGGAGCT GCAGAACAAG
GGGGCGCTGG TGGTCGCCAC CACGCACCTC ACCGAGATCA TCGGCTTCGT GCAGCGCGAG
GAGGGGATGG TGAACGCCGC CATGGCCTTC GACCGCGATA AGCTGGCGCC GCTCTACCGG
CTCGTGGTCG GCGAACCGGG AGAATCGCAC GCTCTCGAAA TAGCCAGCCG CTACGGCCTG
CCCGATCGCG TGGTGCGCTT CGCCCGGGGG ATGCTCGGGA CCATGGAGGC CGACTTCCAT
TCCCTTTTGC GCGACCTCAA GGGAAAGCGG GCTCAACTGG AGCGCGCCCT GGCGGATATG
GCAGAAAGAG AGGAAAAGGT GGCCTTCGCC GAGCGGAACC TGGTGGACCG CAGGGATGAG
GCGGCCCAGT TGGTAAAGGA CGCCAAGGAA AAGGGGTTAT TGGAAGCGCA GCAGATTATC
TGGAAGGCAA AGCGCGAGGT GGCGACCCTT CTGGACGAGG CCAAGCGCGA GAAGACCAAG
ACGCGGGAGG CGAAGGAAAA GCTCGACCAG GCAGCGAACG AGTTGGAGCA GGCGCTGGAA
GAGTTGCACC CCGAGGAGAA CGTGGACCCG GAGAAGGTGT CGGTGGGGGA CGTACTTTTC
GTCAAGCCGC TCAACTGCGA CGCCACCATC CTCGCCATCG ATACGCGCTC CGGCAAGGCG
CGGGTCCGTG CCGGGAGCAT GGAAATGGAG GTGCAGGTCA ATTCGTTGCT AAAGCCCAAG
GGCAAAGAGC CGAAGAAGGT ACAGAAGCGG CGCGAAAAGC AGCAGGCCCA AGAGCAGGAG
CGCGCCGAGC CGGCCTCCAC CATCAACCTT CTCGGGATGC GCGTGGAGGA GGCGGTCGGC
GTTTTAGAAC CGTTCCTGAA CCACGCCGCG CTGGACCGGA TCCCGGAAGT GCACATCGTG
CACGGCAAGG GAACCGGCGC CCTGATGAAG GGGGTGCGGA GCTACTTGGC CGACCACCCG
CTGGTTGCCT CCTTCCGCAC CGGCGAGCGC TACGAAGGGG GCGATGGGGT GACGGTGGTG
ACCCTGCGCT GA
 
Protein sequence
MISTDTLKRL EFDKILDTVA SYAHCDASHF GALSITPLSA RDEIELRLGL VDEVRKLTRF 
GISLKLSEFE DITPQVRAVR PTGAVISPLE LQRFIPTLRV MSAISAQLGF RTDVPLLTSQ
AGSITGFPDL LNPLEHTVNE EGEILDTASR LLADIRGRKK GFTARIKKRL EEIVRERHTA
IFLQDDFITQ RSGRWVIPVR MDSKGMVPGV VHDVSNSGET AFMEPLEIIG LANELENLVA
DERAEEIRIV RQICNWIRED AEQILEQFEA LVRLDILNCI ATLSDKLRSE TPVISPTPAI
LLKSARHPIL TLMGKEVVPL DLELAADNRV MVVTGPNTGG KTIAIKSAGL LCVMALCGMP
VPALPGTVLP LVESILVDIG DEQSIEESLS TFSAHIFKIS SIIEEAGQGA LVLLDELGTG
TEPGQGAAIA CAVLKELQNK GALVVATTHL TEIIGFVQRE EGMVNAAMAF DRDKLAPLYR
LVVGEPGESH ALEIASRYGL PDRVVRFARG MLGTMEADFH SLLRDLKGKR AQLERALADM
AEREEKVAFA ERNLVDRRDE AAQLVKDAKE KGLLEAQQII WKAKREVATL LDEAKREKTK
TREAKEKLDQ AANELEQALE ELHPEENVDP EKVSVGDVLF VKPLNCDATI LAIDTRSGKA
RVRAGSMEME VQVNSLLKPK GKEPKKVQKR REKQQAQEQE RAEPASTINL LGMRVEEAVG
VLEPFLNHAA LDRIPEVHIV HGKGTGALMK GVRSYLADHP LVASFRTGER YEGGDGVTVV
TLR