Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2792 |
Symbol | |
ID | 6782791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3219612 |
End bp | 3220313 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642768786 |
Product | HNH endonuclease |
Protein accession | YP_002139592 |
Protein GI | 197119165 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCTA AATTTTCGCA ACTTGTGGAA TTCGCTGAGC AGCATCAAGG GCGGCCGCTT TCGACTCTTG GGAACAGAAG CTCGTTCCTG CTGGAGGTGT CAGAATCCTC GTTTACATAT ACTCCTGTTA CGACACAACG GCCCCGTCGC CAAAAGTTAA TCCATGCGGG GCGGGTTTTT GAGCGTTACC TCGAGATCGG ATCATTGAAG ACCTCTAAGT ACACAGACCT CACGGTGAAC TCTTCATACA TACTGGCCCT GATCAAGGCG TTCTCAGAGA AAGAACCGAC TATGAACGAA GAGAAGGTGC ACGAATTTGC ATCTAATGCG ATTAATGATT TAGACGAAAT CCCGCAGGGG GTGGCTGAGC CTGAAAGGAG TTCTCATACT ACATCTTCAT ACGCAAGGGA CCATAAGGTA AGGGCTTATG TGATAGCGCG AGCAAAGGGT ACCTGTGAGT ATTGCGGTGA ACTTGGTTTT CTGATGTCTA ATGGCAAGAG CTACTACCTG GAGGCACATC ATGTTATCGC CCTTGCTGAC GAAGGTAGGG ATACCCCCGA TAACGTAATT GCTCTTTGCC CAAAGCACCA CAAGGAAGCA CACTTCGGAA TCAATCGTGA TGAAATTGAA GAGGAAATGA TGATCTTTTT AAGCACTTTG TCTAAAAAGG CGCGGAACAA TAGGGCTGCA CGCAGGCGCT GA
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Protein sequence | MNSKFSQLVE FAEQHQGRPL STLGNRSSFL LEVSESSFTY TPVTTQRPRR QKLIHAGRVF ERYLEIGSLK TSKYTDLTVN SSYILALIKA FSEKEPTMNE EKVHEFASNA INDLDEIPQG VAEPERSSHT TSSYARDHKV RAYVIARAKG TCEYCGELGF LMSNGKSYYL EAHHVIALAD EGRDTPDNVI ALCPKHHKEA HFGINRDEIE EEMMIFLSTL SKKARNNRAA RRR
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