| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2749 |
|---|
| Symbol | |
|---|
| ID | 6782747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3179056 |
|---|
| End bp | 3180120 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768742 |
|---|
| Product | membrane-associated zinc metalloprotease |
|---|
| Protein accession | YP_002139549 |
|---|
| Protein GI | 197119122 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATAC TTTTCGCAAT CATCGCCCTC GGGGCTCTGA TTTTCTTCCA TGAGCTCGGA
CACTTCCTCT TCGCCAAGGC TTTCGGGGTC GGGGTGGAGA AATTCTCTCT CGGCTTCGGC
CCCAAGATCT ACGGCAGGAA AATAGGCGAG ACCGAGTACC TCCTGTCGGC GCTCCCCTTG
GGGGGATACG TGAAGATGGT GGGGGAGGGG GAGGACGTCG AGATCTCCGA AGAGGACCGC
GCCCGCTCCT TCGCCGAGAA GCCGGTGCTG CAGCGGATCG TGATCGTCGC GGCCGGGCCC
ATCTTCAACC TCCTCTTCGC CTACATCCTT TTCATCATCA TCTTCATGGT TGGGGTCCCC
GCCGTCACCA CCAAGGTGGG GGACGTCGTT GCCGATAAAC CCGCCGCCAA GGCAGGCGTG
AAGGCCGGCG ACACCATCCG CTCCGTGAAC GGCAAGCCCG TGGCGCGCTG GGACGACTTC
GCGAAGATCA TCGCCGAGGG GAAGCTCGCG CCGGTCGAGG TAGAGGTGCA GCGGGGGCAG
ACCCCCCTGA AATTCACCAT GGTCCCGGAG AGCCGCACCA GCAAGAACCT CTTGGGGGAC
ACGGTGACCC AGCCGGTGAT AGGCGTGGTT GCAGCCGGCG AGACCGTGAT TGACCATTTC
CCCCCGGGCG AGGCGATAAC GAGGGGGAGC GCCCAGTGCT GGAACGTGAT CAGGCTCACC
GTGCTCTCGC TGGTGCGCCT GGTCGAGCGC GCCATCCCGC TGGACAACAT CGGCGGCCCG
ATCATGATCG TGAAGATGGC GGGGGAACAG GCGGCAGCCG GCGGGGTGAG CTTCCTCGCT
TTCGTGGCGC TCTTGTCGGT GAACCTGGGC GTCCTGAACC TTTTGCCGGT GCCGATTCTC
GATGGCGGGC ACCTGGCGTT TTTCCTGATC GAACTGGTGA CGGGGAGACC GCTCAGCAAG
AGGGCCCGGG AGATCGCCCA GCAGGTTGGG CTCGTGCTCC TGATCGGCCT CATGATGCTC
GCCTTCTACA ACGACATCGC CCGCATGTTC GCCCAAAAGG CGTGA
|
|---|
| Protein sequence | MSILFAIIAL GALIFFHELG HFLFAKAFGV GVEKFSLGFG PKIYGRKIGE TEYLLSALPL
GGYVKMVGEG EDVEISEEDR ARSFAEKPVL QRIVIVAAGP IFNLLFAYIL FIIIFMVGVP
AVTTKVGDVV ADKPAAKAGV KAGDTIRSVN GKPVARWDDF AKIIAEGKLA PVEVEVQRGQ
TPLKFTMVPE SRTSKNLLGD TVTQPVIGVV AAGETVIDHF PPGEAITRGS AQCWNVIRLT
VLSLVRLVER AIPLDNIGGP IMIVKMAGEQ AAAGGVSFLA FVALLSVNLG VLNLLPVPIL
DGGHLAFFLI ELVTGRPLSK RAREIAQQVG LVLLIGLMML AFYNDIARMF AQKA
|
|---|
| |