| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2716 |
|---|
| Symbol | |
|---|
| ID | 6782714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3134959 |
|---|
| End bp | 3136737 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768709 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002139516 |
|---|
| Protein GI | 197119089 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCA GATTAAAATT TCCGCTCAGG TTCAAGATGC TCCTCTCCCA GTTGCTGGTG
GTGTCGGTGG TGCTGAGCCT GATCACCTTC ACCATGGCGA ACCTGTTCCA GGTCGACAAG
ACCGCATACA TCCACGACCT CACTTCGACG GTGGTGCTGC ATACGGCGGA GGAGGCGAAC
GCGCTCCTGG CGGGATACCG GGAGCGGTTG AAGCTCTTCG GTCGCGTCTT GGCCGAGCCG
GAGCTTTCGG GGCGGGACCA GGTGCTGCAG GGCTTTTTCG AGGAGTTCCG CGACTTCGTG
CTGGTTACCC GCAGCGGCCC GGGCGGCGAA CAGACCGTGT ACGACGGCGC TGCGCTGCAG
GCGGTCGGGG TGACCAAAGA GGAGATAGTG GCGAACCTGC AGGCCCATCC GGCGCCGGAA
TCCATTCCGG CAGGGCAGGT GTACCTGGTG AATTCCACGC TCTCGCCCAA GCTTCCCACG
CTCACCCTCA CCATTTCCGA GCCTGCGGCG GGGGGGGCGC CGGTGGTAAC GACGGCGGTG
CTGCGCCTGG ACCGGTTGCA GGAGCTGGCC AAGCGCTCGC GGGTCTTCGA CATCTTCCTG
TTGGACTCGG CCGGGCGCTA CCTGGCGCAC AAGGCGCCCG ACCGGGTTGG GGTTGCAGCC
AATGTCGAAT GGTGGAACCG GGTGAAGGCC CCGCGCAGCT CCGGGATGAC CATGGAGTAC
AAAAAACTCG GCAAGGAGAT GGTGGGAGGA TTCTCGCGCT GCTCGCTGGG GGGGCTGGTG
GTCGGGGTGG AGATACCCAA GAGCGCCGCC TACCTCACCT CGCGCGAACT GCTGAGCGAC
CTTTTGCTCC TGTCGCTGGC GCTTCTGGGT GCGGCGGCCC TTTTGAGCCA GTTCTGGTCG
CGGCATTTCA CGAGCCCACT GGAGAAGCTC TCCGAGGCGA CCCGGATGGT GGGGCAGGGG
CGCTTCGAGA TCGAGGTGAA GGCGGAATCA GGGGACGAGA TCGGCGCGCT GGCCCGGTCC
TTCAACCAGA TGGCCGCCGA GTTGAAAGTG CGCGAAAAGG CCCTCAAGGA CCTCTACGGG
CAACTGGTTC ATTCGGAGAA GATGGCGGCC TTCGGTTCGC TTGGCGCAGG GATCGCCCAT
GAGGTGAAGA ACCCGCTGGC GGGGATCCTC GGCATCACCC AGCTCTCGCT CAGGGGGGCG
GGGGCCGGGC ACCCGCTGGA GAAGAACCTT TTGATCATCG AGAAAGAGAC CAAGCGTTGC
AAGACCATCA TCGAGCACCT GCTCAAGTTT GCGCGCCAGG AGCAGGTCGA GTTCAGCGAG
GTCGACCTGC AGCAGGTGGT GGCGGATGCT CTTGCCATCG TCGACCACCA GTTGGGGATC
AACAGCATCA AGGTGGAGCA GGAACTGGAG CCGGGGATGC CCACCTGCCG CGGCAACGCG
AACCAGTTGC AGCAGGTGCT CATGAACCTG ATGCTCAACG CGCAGCAGGC GATGAGCGGG
AAGACCGGGA CGGTGAAGCT TTCCGGGCGC AGGCTGGAAA AGGGGGGAGT GGAATTGCGG
GTGGCGGACA ACGGCCCCGG TATCAGCAAG GAGATCCAGG GGAAGATCTT CGATCCCTTC
TTCACCACCA AGCCGGCAGG GCAGGGAACG GGGCTCGGCC TCTCGGTCAC CTACGGCATC
GTCAAGGATC ACGGCGGCGA GATTCACCTG GAGAGCGAGG AGGGGTTGGG GACTACCTTC
ATCATCACCC TACCACCCTC CGCGGCAGCC AATGGCTAA
|
|---|
| Protein sequence | MHTRLKFPLR FKMLLSQLLV VSVVLSLITF TMANLFQVDK TAYIHDLTST VVLHTAEEAN
ALLAGYRERL KLFGRVLAEP ELSGRDQVLQ GFFEEFRDFV LVTRSGPGGE QTVYDGAALQ
AVGVTKEEIV ANLQAHPAPE SIPAGQVYLV NSTLSPKLPT LTLTISEPAA GGAPVVTTAV
LRLDRLQELA KRSRVFDIFL LDSAGRYLAH KAPDRVGVAA NVEWWNRVKA PRSSGMTMEY
KKLGKEMVGG FSRCSLGGLV VGVEIPKSAA YLTSRELLSD LLLLSLALLG AAALLSQFWS
RHFTSPLEKL SEATRMVGQG RFEIEVKAES GDEIGALARS FNQMAAELKV REKALKDLYG
QLVHSEKMAA FGSLGAGIAH EVKNPLAGIL GITQLSLRGA GAGHPLEKNL LIIEKETKRC
KTIIEHLLKF ARQEQVEFSE VDLQQVVADA LAIVDHQLGI NSIKVEQELE PGMPTCRGNA
NQLQQVLMNL MLNAQQAMSG KTGTVKLSGR RLEKGGVELR VADNGPGISK EIQGKIFDPF
FTTKPAGQGT GLGLSVTYGI VKDHGGEIHL ESEEGLGTTF IITLPPSAAA NG
|
|---|
| |