| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2707 |
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| Symbol | |
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| ID | 6782705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3124265 |
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| End bp | 3124957 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642768700 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002139507 |
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| Protein GI | 197119080 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0546341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTAG CTGAGAACCT GGGGAAAATC AGGGAGCGAA TCAGGCAGGC GGCGCTCAGG
GCCGGGAGGG AACCGGATGC GGTCCGGCTG GTCGCGGTCT CCAAGACCAA GCCTGCCGCG
GCGATCGAGG AAGCTTTCGC CTGCGGGCAG CAGATCTTCG GCGAGAACTA CGTGCAGGAG
CTGGTGGGGA AAAAGGGCGA GCTGCCGCCG GAGATTTCCT GGCACTTCAT CGGCAACCTG
CAGAGCAACA AGGTGCGCCA GATAGCGGGG ATGGTCGACC TGATCCACTC GGTGGACCGC
CTGTCGCTCG CCGCCGAAAT CGACCGCCAG TGGGGGGCCT TGGGAAAGGT CTGCGAGGTG
CTGATCCAGG TCAACATCTC CCAAGAGGAG ACCAAGGGGG GGACCAGCAG CGATGAGCTG
TTCCAACTGG TGCGCGACGT GGCCAAGCTC TCCAACCTGC GCGTCGTGGG GCTCATGACC
ATGCCCCCCT TCTTCGACGA CCCCGAGGGG GCGCGCCCCT ATTTCCGGGA ACTAAGAGAG
CTGGCCCGGA AGCTGGAGGC TGCCGCCATA CCTGGCGTCT CGATGCTTGA ACTGTCGATG
GGAATGTCGG GCGATTTCGA GGCCGCCATA GAAGAGGGGG CGACTCTGGT GCGCGTAGGC
TCGGCGCTGT TCGGGGAGAG GGAATACCGC TAG
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| Protein sequence | MSVAENLGKI RERIRQAALR AGREPDAVRL VAVSKTKPAA AIEEAFACGQ QIFGENYVQE
LVGKKGELPP EISWHFIGNL QSNKVRQIAG MVDLIHSVDR LSLAAEIDRQ WGALGKVCEV
LIQVNISQEE TKGGTSSDEL FQLVRDVAKL SNLRVVGLMT MPPFFDDPEG ARPYFRELRE
LARKLEAAAI PGVSMLELSM GMSGDFEAAI EEGATLVRVG SALFGEREYR
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