| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2702 |
|---|
| Symbol | |
|---|
| ID | 6782700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3119626 |
|---|
| End bp | 3120825 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768695 |
|---|
| Product | SAM-dependent methyltransferase-like protein |
|---|
| Protein accession | YP_002139502 |
|---|
| Protein GI | 197119075 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000137033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAG CATGCACGGT TGGGCCGGAA TCGGTACGGA TGATTGAGCT CGGGCACCCC
TGGATCATCG CCGACAGCTA CACCAAAAAG TGGCCGGCGG GCGAGACCGG CGACCTGGTG
GAACTGGTGG ACCCTTCGGG GCGCTTCCTG GCCCAGGCGC TATTGGATCC CAAGGACCGG
ATCGTCGCGC GGGTGCTGTC GCGGGAACGG ATGCGCCTGG ACCGGGGCTG GGTGAAGGAG
CGGCTGCAAA GGGCGATAGC GATGCGAAGA GACCATGCCG GGCTCGTCGA CACCGACGCC
TATCGTCTGG TCAACGGCGA GGGGGACCTC CTTCCCGGGA TCACGGTAGA TCACTACGGT
GATTACCTGA TGGTGCAGAT CTACTGCTCC GGTTGGCGCA GGCACCTGAA GCTGGTAACC
CAGGCGCTCG ATGAGTTGCT GGAGCCGGCC GGGATCTACG AGAAGAGCCG CCCCCAGAAC
ACCCGGGAGC TGGAATCGGG TGGGGAGGGG AAGAAATACG GGCAGCTCCT CTCGGGCAAA
CCCGCTCCGG AACCGCTCGT GGTGCTGGAG AACGGGCTCA GCTTCCAGGT GAGCCTGGAG
CGCGGCCTTA ACACCGGGTT GTTCCTCGAC CAGCGCAAGA ACCGGCGCGA CCTGATGGCG
CGGGTGCAGG GGAAGCGCTT TTTGAACCTC TTCAGCTATA CCGGCGCCTT CTCCGTCGCC
GCAGCAGCGG CAGGCGCAAG CCTTGTCACC AGCGTCGACG CTTCGCCCGG CTACATGGAA
CAGGCCCGCT CCAACTTCAG CGTCAACCGG CTGAACCCCA AACGGCACGA GTTCCTGGTT
GGGGACTGCC TGACCGTGCT CGACGATCTG GCGCGGCAAA AGAAATGCTA CGACGTGGTT
CTCATGGACC CGCCGTCTTT TTCCACCACG TCCAAGAGCC GCTTCACCAC GCGCGGCGGG
ACCGCTGACC TGGTTGCCGC CGCTATGAAA TTGTTGAAAG GGGGAGGGTT GCTGATCGCT
TCCTCGAACC ATCAGAAGGT GGATCTTGCC GATTACCTGA AGGAATTGCG CCGCGGCGCG
CTTCAGGCGG GGGGGACGTT GCAGGTGGTG TCGCTATCGG GTCAGCCGGA GGACTTCCCG
TACCCGGTCA CTTTCCCGGA GGGGCGCTAT CTCAAGTACG CGATCTGCGT AAAGGGGTAG
|
|---|
| Protein sequence | MSKACTVGPE SVRMIELGHP WIIADSYTKK WPAGETGDLV ELVDPSGRFL AQALLDPKDR
IVARVLSRER MRLDRGWVKE RLQRAIAMRR DHAGLVDTDA YRLVNGEGDL LPGITVDHYG
DYLMVQIYCS GWRRHLKLVT QALDELLEPA GIYEKSRPQN TRELESGGEG KKYGQLLSGK
PAPEPLVVLE NGLSFQVSLE RGLNTGLFLD QRKNRRDLMA RVQGKRFLNL FSYTGAFSVA
AAAAGASLVT SVDASPGYME QARSNFSVNR LNPKRHEFLV GDCLTVLDDL ARQKKCYDVV
LMDPPSFSTT SKSRFTTRGG TADLVAAAMK LLKGGGLLIA SSNHQKVDLA DYLKELRRGA
LQAGGTLQVV SLSGQPEDFP YPVTFPEGRY LKYAICVKG
|
|---|
| |