Gene Gbem_2694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2694 
Symbol 
ID6782693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp3115697 
End bp3116326 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content55% 
IMG OID642768689 
Productsurface antigen msp4 family protein 
Protein accessionYP_002139496 
Protein GI197119069 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000777895 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAGTAGTGGC TTCCGTGCTG CTCATGGCAG CCCTGGCAAT GCCAAATCTC 
AGCTCTGCAG CTCCCATGCG TCCCGGTCCG TATTTTTCAG GTTTCATCGG AGTGACCGTT 
CCTTCCGAGA CCCATGCAGG AGGAGACTTC AATGACACCG TCAATTTCGA TCCGGGCCTG 
AACATTGGTG GCACGGCGGG CATGGACTTC GGCACGGTGC GCCTCGAAGG CGAGATATCC 
TACAAAGAAG GGAACGTCGA CACCATCTAT TTCAATAACT CTCCCCCCCC GAATAGGTTC 
ACGAATACAG ACGTGAGCCT GAACGCCACC GCATTCATGG CGAACATGTT CATCGATCTG 
CACAACAACG GTCCCATCAC GCCGTACCTT GGCGGCGGTG TCGGATTCGC CATCTTGAAC 
CTTGACGACA AGTTCGGTGA TTTCTACACT TCGGACGAAG AAGTAGTACT CGCTTACCAG 
GCGGGGGGGG GACTTGAGGT CGCGCTGAAC CGGCAGATGT CGTTGGACCT TGGGTACCGC 
TATTTCCGCA CCGACGAGGC AAACTTCGCC GATACCAAGA TGAGGTTCGA AAGCCACAAC 
GCAACGGTGG GCCTGAGGAT CAAATTCTGA
 
Protein sequence
MKKTVVASVL LMAALAMPNL SSAAPMRPGP YFSGFIGVTV PSETHAGGDF NDTVNFDPGL 
NIGGTAGMDF GTVRLEGEIS YKEGNVDTIY FNNSPPPNRF TNTDVSLNAT AFMANMFIDL 
HNNGPITPYL GGGVGFAILN LDDKFGDFYT SDEEVVLAYQ AGGGLEVALN RQMSLDLGYR 
YFRTDEANFA DTKMRFESHN ATVGLRIKF