Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2680 |
Symbol | |
ID | 6782677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3103888 |
End bp | 3105297 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642768673 |
Product | cytochrome c family protein |
Protein accession | YP_002139482 |
Protein GI | 197119055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTGCA CACCATTCGC ACTCTACCAT TCCGCAATCA AAACTGGCGG GTGGATTACT GGGTTCACTA AAGGCGGGAT ACAGTTGAAG ATCATAATTA ACGTAGTTTT GGCTTTTGCA TTCGTGCTTA TTTCCGTACC GGCATTTGCT TTTCATTCTG GCGGTGTCGC CGAGTGCGAA GGTTGCCACT CCATGCACAA CTCGTTTGAA GGTGCCGCCA ATGTGACCGG TATGAGCCAG TATAAGTCCG GCCCGTACCT CCTGAAAGCT CAGGACCAGT CCGGTGCTTG CCTCAACTGC CACCAGGCTG GCGACACCAC CCCCGGCCCC GTTACCGGTA AGGACAATGG CTACCACATC TCCACCGCAG GTGTTACTGC ATATGACAGC ACCACCCCCG TTGAATTAAC CCCTGGCGGA GACTTCGCAT GGCTCAAAAA GACTATGACT TTTTATTTGT GGCATGACCC ATCAGTCTCC ACTGAAGGTG ATCGTCACGG CCACAACATC ATCGCGGTAG ACTTTGGCTA CACCCAGGAC ATGGTCCTGA CCGCTGCCCC TGGTGGCACC TACCCGGCAG CCAACCTGGC CTGCTCCTCC TGCCACGATC CCCATGGCAA GTACCGTCGT CTTGCCGACG GCACCAAGGC CACCACAGGT CTGCCGATTT TCAACTCCGG TTCCTACATC AACAGCAAAG ATCCGATCAC CGGTGTTTCC GCCGTCGGCG TGTACCGCCT CCTCGCAGGT GTAGGCTACC AGCCGAAGTC CCTTACCGGC TCCTACGCCT TCGCGAACCC ATCTCCGGAC GCACTTGCTC CGAGCAGCTA CAACGGACTC AACGATACCA TCGCAGGCGG TAAAGACCGA GTTGCTTACG GCCAGGGTAT GTCCGAGTGG TGTGCTAACT GCCACACCGC AATGCACAAG GACAACTACA CCTCCGGCAC TAAAGGGCTG GTTCACCCTG CAGGTAACGG TGCCAAGCTG ACCGCCGCCA TTGCCGGCAA CTACAAATCC TATGTTTCTT CCGGCATCGC CGGCACCCCC GCATCAGGTG GCTATAGCTC CCTGGCTCCG TTTGAACTCG GTTCTGGTGA CTATGCCGCC ATCAAAACCT TTCAGGCTAG TCCGGGTGGC GTCAGCACCT CCAGCAACGT GCTCTGCCTC TCCTGCCACC GTGCTCACGC TTCCGCCTTC GAAAGCATGA CCCGCTACTA CCTGGGCAAC GAGTTCATGA CGGTCGCTGA TGCATCCAAC GCCGCCGCTT ACGACTCCAG CACCACCGAG AACAAGATCA ACACCGGCTA CAGCGTCACT CAGCAGCAGA ACGCCTACAA CGGCCGTCCG GCATCTCTTT TCGGACCGTA CGCACGTGAC TACTGCAACA AGTGCCACGC CAAAGACTAG
|
Protein sequence | MFCTPFALYH SAIKTGGWIT GFTKGGIQLK IIINVVLAFA FVLISVPAFA FHSGGVAECE GCHSMHNSFE GAANVTGMSQ YKSGPYLLKA QDQSGACLNC HQAGDTTPGP VTGKDNGYHI STAGVTAYDS TTPVELTPGG DFAWLKKTMT FYLWHDPSVS TEGDRHGHNI IAVDFGYTQD MVLTAAPGGT YPAANLACSS CHDPHGKYRR LADGTKATTG LPIFNSGSYI NSKDPITGVS AVGVYRLLAG VGYQPKSLTG SYAFANPSPD ALAPSSYNGL NDTIAGGKDR VAYGQGMSEW CANCHTAMHK DNYTSGTKGL VHPAGNGAKL TAAIAGNYKS YVSSGIAGTP ASGGYSSLAP FELGSGDYAA IKTFQASPGG VSTSSNVLCL SCHRAHASAF ESMTRYYLGN EFMTVADASN AAAYDSSTTE NKINTGYSVT QQQNAYNGRP ASLFGPYARD YCNKCHAKD
|
| |